CHANGELOG.md
LICENSE
MANIFEST.in
README.md
pyproject.toml
src/guppy/__init__.py
src/guppy/logging_config.py
src/guppy/main.py
src/guppy/runFiberPhotometryAnalysis.ipynb
src/guppy/analysis/__init__.py
src/guppy/analysis/artifact_removal.py
src/guppy/analysis/combine_data.py
src/guppy/analysis/compute_psth.py
src/guppy/analysis/control_channel.py
src/guppy/analysis/cross_correlation.py
src/guppy/analysis/io_utils.py
src/guppy/analysis/psth_average.py
src/guppy/analysis/psth_peak_and_area.py
src/guppy/analysis/psth_utils.py
src/guppy/analysis/standard_io.py
src/guppy/analysis/timestamp_correction.py
src/guppy/analysis/transients.py
src/guppy/analysis/transients_average.py
src/guppy/analysis/z_score.py
src/guppy/extractors/__init__.py
src/guppy/extractors/base_recording_extractor.py
src/guppy/extractors/csv_recording_extractor.py
src/guppy/extractors/dandi_nwb_recording_extractor.py
src/guppy/extractors/detect_acquisition_formats.py
src/guppy/extractors/doric_recording_extractor.py
src/guppy/extractors/npm_recording_extractor.py
src/guppy/extractors/nwb_recording_extractor.py
src/guppy/extractors/tdt_recording_extractor.py
src/guppy/frontend/__init__.py
src/guppy/frontend/artifact_removal.py
src/guppy/frontend/dandi_selector.py
src/guppy/frontend/frontend_utils.py
src/guppy/frontend/input_parameters.py
src/guppy/frontend/npm_gui_prompts.py
src/guppy/frontend/parameterized_plotter.py
src/guppy/frontend/progress.py
src/guppy/frontend/sidebar.py
src/guppy/frontend/storenames_config.py
src/guppy/frontend/storenames_instructions.py
src/guppy/frontend/storenames_selector.py
src/guppy/frontend/visualization_dashboard.py
src/guppy/orchestration/home.py
src/guppy/orchestration/preprocess.py
src/guppy/orchestration/psth.py
src/guppy/orchestration/read_raw_data.py
src/guppy/orchestration/save_parameters.py
src/guppy/orchestration/storenames.py
src/guppy/orchestration/transients.py
src/guppy/orchestration/visualize.py
src/guppy/testing/__init__.py
src/guppy/testing/api.py
src/guppy/testing/consistency.py
src/guppy/testing/mock_recording_extractor.py
src/guppy/testing/scripts/create_mock_nwbfile_ndx_fiber_photometry_v0_1_ndx_events_v0_2.py
src/guppy/testing/scripts/create_mock_nwbfile_ndx_fiber_photometry_v0_2_ndx_events_v0_2.py
src/guppy/testing/scripts/create_mock_nwbfile_ndx_fiber_photometry_v0_2_ndx_events_v0_4.py
src/guppy/testing/scripts/create_stubbed_testing_data.py
src/guppy/testing/scripts/stub_me112_me113_session.py
src/guppy/testing/scripts/summarize_stubbed_testing_data.py
src/guppy/utils/__init__.py
src/guppy/utils/utils.py
src/guppy/utils/validation.py
src/guppy/visualization/__init__.py
src/guppy/visualization/preprocessing.py
src/guppy/visualization/transients.py
src/guppy_neuro.egg-info/PKG-INFO
src/guppy_neuro.egg-info/SOURCES.txt
src/guppy_neuro.egg-info/dependency_links.txt
src/guppy_neuro.egg-info/entry_points.txt
src/guppy_neuro.egg-info/requires.txt
src/guppy_neuro.egg-info/top_level.txt