LICENSE
README.md
pyproject.toml
src/scPerturb_CMap.egg-info/PKG-INFO
src/scPerturb_CMap.egg-info/SOURCES.txt
src/scPerturb_CMap.egg-info/dependency_links.txt
src/scPerturb_CMap.egg-info/entry_points.txt
src/scPerturb_CMap.egg-info/requires.txt
src/scPerturb_CMap.egg-info/top_level.txt
src/scperturb_cmap/__init__.py
src/scperturb_cmap/cli.py
src/scperturb_cmap/config.py
src/scperturb_cmap/worker.py
src/scperturb_cmap.egg-info/PKG-INFO
src/scperturb_cmap.egg-info/SOURCES.txt
src/scperturb_cmap.egg-info/dependency_links.txt
src/scperturb_cmap.egg-info/entry_points.txt
src/scperturb_cmap.egg-info/requires.txt
src/scperturb_cmap.egg-info/top_level.txt
src/scperturb_cmap/analysis/aggregate.py
src/scperturb_cmap/analysis/enrichment.py
src/scperturb_cmap/analysis/power.py
src/scperturb_cmap/api/explain.py
src/scperturb_cmap/api/score.py
src/scperturb_cmap/api/settings.py
src/scperturb_cmap/configs/__init__.py
src/scperturb_cmap/configs/train.yaml
src/scperturb_cmap/data/lincs_loader.py
src/scperturb_cmap/data/preprocess.py
src/scperturb_cmap/data/scrna_loader.py
src/scperturb_cmap/data/signatures.py
src/scperturb_cmap/explainability/__init__.py
src/scperturb_cmap/explainability/feature_importance.py
src/scperturb_cmap/explainability/narrative_generator.py
src/scperturb_cmap/explainability/pathway_enrichment.py
src/scperturb_cmap/explainability/uncertainty.py
src/scperturb_cmap/io/cloud_storage.py
src/scperturb_cmap/io/schemas.py
src/scperturb_cmap/io/serde.py
src/scperturb_cmap/models/baseline.py
src/scperturb_cmap/models/dual_encoder.py
src/scperturb_cmap/models/evaluate.py
src/scperturb_cmap/models/train.py
src/scperturb_cmap/ui/app.py
src/scperturb_cmap/utils/device.py
src/scperturb_cmap/utils/metrics.py
src/scperturb_cmap/utils/seed.py
src/scperturb_cmap/viz/plots.py
tests/test_aggregate.py
tests/test_alignment.py
tests/test_api.py
tests/test_baseline.py
tests/test_cli.py
tests/test_device.py
tests/test_dual_encoder.py
tests/test_end_to_end.py
tests/test_enrichment.py
tests/test_explainability.py
tests/test_guardrails.py
tests/test_lincs_gctx.py
tests/test_lincs_loader.py
tests/test_pairs.py
tests/test_power.py
tests/test_preprocess.py
tests/test_schemas.py
tests/test_signatures.py