torch>=2.0.0
pytorch-lightning>=2.1.0
scanpy>=1.10.0
anndata>=0.10.0
POT>=0.9.0
torchdiffeq
pyvista>=0.40.0
numpy<2.1.0
pandas>=2.0.0
scikit-learn
tqdm
einops
timm
matplotlib
plotly
ipywidgets
ipython
nbformat>=4.2.0
seaborn
anywidget

[docs]
mkdocs-material
mkdocs-jupyter
mkdocstrings[python]
