.gitignore
.pre-commit-config.yaml
CITATION.cff
CODE_OF_CONDUCT.md
CONTRIBUTING.md
LICENSE
MANIFEST.in
README.md
pyproject.toml
uv.lock
src/cosmicqc/__init__.py
src/cosmicqc/analyze.py
src/cosmicqc/cli.py
src/cosmicqc/detection.py
src/cosmicqc.egg-info/PKG-INFO
src/cosmicqc.egg-info/SOURCES.txt
src/cosmicqc.egg-info/dependency_links.txt
src/cosmicqc.egg-info/entry_points.txt
src/cosmicqc.egg-info/requires.txt
src/cosmicqc.egg-info/scm_file_list.json
src/cosmicqc.egg-info/scm_version.json
src/cosmicqc.egg-info/top_level.txt
src/cosmicqc/data/qc_nuclei_thresholds_default.yml