LICENSE
README.md
pyproject.toml
src/sentinel/__init__.py
src/sentinel/__main__.py
src/sentinel/anchor_check.py
src/sentinel/charr.py
src/sentinel/cli.py
src/sentinel/config.py
src/sentinel/directional.py
src/sentinel/extract_ad.py
src/sentinel/genotyper.py
src/sentinel/identity_loh.py
src/sentinel/io_ad.py
src/sentinel/make_html_report.py
src/sentinel/make_xlsx_report.py
src/sentinel/mtdna_mixture.py
src/sentinel/panel_builder.py
src/sentinel/per_chrom.py
src/sentinel/pipeline.py
src/sentinel/pivot.py
src/sentinel/post_process.py
src/sentinel/read_haplotypes.py
src/sentinel/report.py
src/sentinel/sct_discriminator.py
src/sentinel/tails.py
src/sentinel/umi_metrics.py
src/sentinel/tests/__init__.py
src/sentinel/tests/conftest.py
src/sentinel/tests/synth.py
src/sentinel/tests/test_charr.py
src/sentinel/tests/test_directional.py
src/sentinel/tests/test_identity_loh.py
src/sentinel/tests/test_per_chrom.py
src/sentinel/tests/test_pipeline_smoke.py
src/sentinel/tests/test_read_haplotypes.py
src/sentinel/tests/test_sct_discriminator.py
src/sentinel/tests/test_tails.py
src/sentinel/tests/test_umi_metrics.py
src/sentinel_cd.egg-info/PKG-INFO
src/sentinel_cd.egg-info/SOURCES.txt
src/sentinel_cd.egg-info/dependency_links.txt
src/sentinel_cd.egg-info/entry_points.txt
src/sentinel_cd.egg-info/requires.txt
src/sentinel_cd.egg-info/top_level.txt