.env.example
.readthedocs.yaml
AGENTS.md
CHANGELOG.md
CLAUDE.md
CONTRIBUTING.md
GETTING_STARTED.md
LICENSE
MANIFEST.in
QUICK_REFERENCE.md
README.md
STYLE_GUIDE.md
hms-commander_logo.svg
mkdocs.yml
pyproject.toml
tmux.cmd
uv.lock
.agents/README.md
.agents/native-skills/dev_invoke_claude-code/SKILL.md
.agents/skills/README.md
.agents/skills/hms_clone_components/SKILL.md
.agents/skills/hms_execute_runs/SKILL.md
.agents/skills/hms_execute_runs/examples/basic-run.md
.agents/skills/hms_execute_runs/reference/compute_run.md
.agents/skills/hms_export_cloud-native/SKILL.md
.agents/skills/hms_extract_dss-results/SKILL.md
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.agents/skills/hms_parse_basin-models/SKILL.md
.agents/skills/hms_query_docs/SKILL.md
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.codex/config.toml
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.github/pull_request_template.md
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/feature_request.md
docs/AGENTS.md
docs/CLB_ENGINEERING_APPROACH.md
docs/DOCUMENTATION_INDEX.md
docs/README.md
docs/index.md
docs/about/clb-engineering.md
docs/api/_constants.md
docs/api/_parsing.md
docs/api/atlas14_storm.md
docs/api/dss_core.md
docs/api/frequency_storm.md
docs/api/hms_aorc.md
docs/api/hms_arf.md
docs/api/hms_basin.md
docs/api/hms_basin_builder.md
docs/api/hms_cmdr.md
docs/api/hms_control.md
docs/api/hms_dss.md
docs/api/hms_dss_grid.md
docs/api/hms_examples.md
docs/api/hms_gage.md
docs/api/hms_gauge_data.md
docs/api/hms_gauge_study.md
docs/api/hms_geo.md
docs/api/hms_grid.md
docs/api/hms_huc.md
docs/api/hms_jython.md
docs/api/hms_m3_model.md
docs/api/hms_met.md
docs/api/hms_output.md
docs/api/hms_prj.md
docs/api/hms_results.md
docs/api/hms_roundtrip_validator.md
docs/api/hms_run.md
docs/api/hms_sqlite.md
docs/api/hms_taudem.md
docs/api/hms_terrain.md
docs/api/hms_utils.md
docs/api/hms_watershed_verification.md
docs/api/scs_type_storm.md
docs/assets/CLBEngineeringHzLogo.png
docs/assets/hms-commander_logo.svg
docs/data_formats/basin_file.md
docs/data_formats/control_file.md
docs/data_formats/dss_integration.md
docs/data_formats/gage_file.md
docs/data_formats/geo_files.md
docs/data_formats/met_file.md
docs/data_formats/overview.md
docs/data_formats/project_file.md
docs/data_formats/run_file.md
docs/development/multi-harness-agent-contract.md
docs/examples/overview.md
docs/getting_started/installation.md
docs/getting_started/project_initialization.md
docs/getting_started/quick_start.md
docs/llm_dev/architecture.md
docs/llm_dev/claude_md.md
docs/llm_dev/cognitive_architecture.md
docs/llm_dev/contributing.md
docs/llm_dev/overview.md
docs/llm_dev/publishing.md
docs/llm_dev/release_notes.md
docs/llm_dev/style_guide.md
docs/notebooks/21_taudem_to_hms_atlas14.ipynb
docs/overrides/main.html
docs/stylesheets/clb-branding.css
docs/stylesheets/extra.css
docs/user_guide/atlas14_updates.md
docs/user_guide/basin_models.md
docs/user_guide/clone_workflows.md
docs/user_guide/cloud_native_export.md
docs/user_guide/control_specs.md
docs/user_guide/dss_operations.md
docs/user_guide/execution.md
docs/user_guide/gages.md
docs/user_guide/geospatial.md
docs/user_guide/meteorologic_models.md
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examples/00_overview.ipynb
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examples/04_run_management.ipynb
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examples/06_results_dss.ipynb
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examples/08_m3_models.ipynb
examples/09_m3_conversion.ipynb
examples/101_guide_basic_model_setup.ipynb
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examples/103_guide_gis_terrain_data.ipynb
examples/104_guide_basin_methods_loss_transform.ipynb
examples/105_guide_calibration_validation.ipynb
examples/106_guide_advanced_analysis.ipynb
examples/10_atlas14_hyetograph.ipynb
examples/11_frequency_storm.ipynb
examples/12_scs_type_validation.ipynb
examples/13_atlas14_multiduration_validation.ipynb
examples/14a_aorc_download.ipynb
examples/14b_aorc_grid_setup.ipynb
examples/14c_aorc_hms_execution.ipynb
examples/15_upstream_network_analysis.ipynb
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examples/16_sqlite_grid_database.ipynb
examples/17_batch_parameters.ipynb
examples/18_arf_application.ipynb
examples/19_cloud_native_export.ipynb
examples/20_pmtiles_web_map.ipynb
examples/21_taudem_to_hms_atlas14.ipynb
examples/22_ground_truth_validation.ipynb
examples/AGENTS.md
examples/CLAUDE.md
examples/aorc_integration_example.py
examples/atlas14_100yr_24hr.csv
examples/extract_example.py
examples/original_notebooks/01_multi_version_execution.ipynb
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examples/original_notebooks/09_frequency_storm_variable_durations.ipynb
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examples/original_notebooks/11_atlas14_multiduration_validation.ipynb
examples/original_notebooks/clone_workflow.ipynb
hms_commander/AGENTS.md
hms_commander/Atlas14Storm.py
hms_commander/CLAUDE.md
hms_commander/Decorators.py
hms_commander/FrequencyStorm.py
hms_commander/HmsAorc.py
hms_commander/HmsArf.py
hms_commander/HmsBasin.py
hms_commander/HmsBasinBuilder.py
hms_commander/HmsCmdr.py
hms_commander/HmsControl.py
hms_commander/HmsExamples.py
hms_commander/HmsGage.py
hms_commander/HmsGaugeData.py
hms_commander/HmsGaugeStudy.py
hms_commander/HmsGeo.py
hms_commander/HmsGrid.py
hms_commander/HmsHuc.py
hms_commander/HmsJython.py
hms_commander/HmsM3Model.py
hms_commander/HmsMet.py
hms_commander/HmsOutput.py
hms_commander/HmsPrj.py
hms_commander/HmsResults.py
hms_commander/HmsRoundTripValidator.py
hms_commander/HmsRun.py
hms_commander/HmsSqlite.py
hms_commander/HmsTauDEM.py
hms_commander/HmsTerrain.py
hms_commander/HmsUtils.py
hms_commander/HmsWatershedVerification.py
hms_commander/LoggingConfig.py
hms_commander/ScsTypeStorm.py
hms_commander/__init__.py
hms_commander/_constants.py
hms_commander/_hyetograph.py
hms_commander/_parsing.py
hms_commander/_project_registry.py
hms_commander/_spatial.py
hms_commander.egg-info/PKG-INFO
hms_commander.egg-info/SOURCES.txt
hms_commander.egg-info/dependency_links.txt
hms_commander.egg-info/requires.txt
hms_commander.egg-info/top_level.txt
hms_commander/data/README.md
hms_commander/data/__init__.py
hms_commander/data/m3_hms_catalog.csv
hms_commander/data/scs_type_i.npy
hms_commander/data/scs_type_ia.npy
hms_commander/data/scs_type_ii.npy
hms_commander/data/scs_type_iii.npy
hms_commander/data/tp40_dimensionless_pattern.npy
hms_commander/dss/__init__.py
hms_commander/dss/_hec_monolith.py
hms_commander/dss/catalog.py
hms_commander/dss/core.py
hms_commander/dss/hms_dss.py
hms_commander/dss/hms_dss_grid.py
scripts/generate_ground_truth_fixtures.py
scripts/agent_framework/sync_codex_skill_bridge.py
scripts/agent_hooks/README.md
scripts/agent_hooks/hook_dispatch.py
tests/AGENTS.md
tests/conftest.py
tests/test_atlas14_bootstrap.py
tests/test_basin.py
tests/test_basin_builder.py
tests/test_constants.py
tests/test_control.py
tests/test_dss_catalog.py
tests/test_gage.py
tests/test_gauge_study.py
tests/test_ground_truth_validation.py
tests/test_hms_arf.py
tests/test_hms_examples.py
tests/test_hms_sqlite.py
tests/test_hyetograph_kernel.py
tests/test_met.py
tests/test_parsing.py
tests/test_results.py
tests/test_roundtrip_validator.py
tests/test_run.py
tests/test_scs_type.py
tests/test_spatial_helpers.py
tests/test_storm_generation.py
tests/test_taudem.py
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tests/test_watershed_verification.py
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