cobra
pandas
numpy
scipy
matplotlib
requests
scikit-learn
scikit-posthocs
seaborn
umap-learn>=0.5.6
biodbs
tqdm
optlang
networkx
zeep
pint
pingouin
scanpy
tomlkit
dask[distributed]
openpyxl

[:python_version >= "3.10" and python_version < "3.13"]
numba>=0.59

[:python_version >= "3.13"]
numba>=0.63

[dev]
pip-tools
pytest
flake8
pytest-cov>=4.0.0

[dlkcat]
torch
rdkit

[doc]
mkdocs>=1.6
mkdocs-material>=9.5
mkdocstrings[python]>=0.26
mkdocs-jupyter>=0.25
mkdocs-redirects<1.2.3,>=1.2
pymdown-extensions>=10.8
black>=24.0
nbconvert>=7.16
ipykernel
ipywidgets
