README.md
setup.py
src/niiprep/__init__.py
src/niiprep/autocrop.py
src/niiprep/bias_correct.m
src/niiprep/bias_correct_spm.py
src/niiprep/cli.py
src/niiprep/crop.py
src/niiprep/denoise_mp2rage.py
src/niiprep/mask.py
src/niiprep/matlab_denoise.py
src/niiprep/matlab_runner.py
src/niiprep/mip.py
src/niiprep/montage.py
src/niiprep/nii2mp4.py
src/niiprep/patchify_nii.py
src/niiprep/registration.py
src/niiprep/resample.py
src/niiprep/round.py
src/niiprep/utils.py
src/niiprep.egg-info/PKG-INFO
src/niiprep.egg-info/SOURCES.txt
src/niiprep.egg-info/dependency_links.txt
src/niiprep.egg-info/entry_points.txt
src/niiprep.egg-info/requires.txt
src/niiprep.egg-info/top_level.txt
src/niiprep/denoise_lavi/denoise_with_vst_map.m
src/niiprep/denoise_lavi/get_BM4D_profile.m
src/niiprep/denoise_lavi/homomorphic_gauss_estimation.m
src/niiprep/denoise_lavi/lpf.m
src/niiprep/denoise_lavi/rice_sigma_mapEST.m
src/niiprep/denoise_lavi/RiceOptVST/Legal_Notice.txt
src/niiprep/denoise_lavi/RiceOptVST/README.txt
src/niiprep/denoise_lavi/RiceOptVST/Rice_VST_A.mat
src/niiprep/denoise_lavi/RiceOptVST/Rice_VST_B.mat
src/niiprep/denoise_lavi/RiceOptVST/function_stdEst.m
src/niiprep/denoise_lavi/RiceOptVST/function_stdEst_original.m
src/niiprep/denoise_lavi/RiceOptVST/riceVST.m
src/niiprep/denoise_lavi/RiceOptVST/riceVST_EUI.m
src/niiprep/denoise_lavi/RiceOptVST/riceVST_sigmaEst.m
src/niiprep/denoise_lavi/bm4d_matlab_package_4.2.5/LICENSE
src/niiprep/denoise_lavi/bm4d_matlab_package_4.2.5/README.md
src/niiprep/denoise_lavi/bm4d_matlab_package_4.2.5/bm4d/BM4D.m
src/niiprep/denoise_lavi/bm4d_matlab_package_4.2.5/bm4d/BM4DProfile.m
src/niiprep/denoise_lavi/bm4d_matlab_package_4.2.5/bm4d/bm4dmx.mexa64
src/niiprep/denoise_lavi/bm4d_matlab_package_4.2.5/bm4d/bm4dmx.mexmaca64
src/niiprep/denoise_lavi/bm4d_matlab_package_4.2.5/bm4d/bm4dmx.mexmaci64
src/niiprep/denoise_lavi/bm4d_matlab_package_4.2.5/bm4d/bm4dmx.mexw64
src/niiprep/denoise_lavi/bm4d_matlab_package_4.2.5/bm4d/param_matching_data.mat
tests/test_montage.py