.gitignore
.pre-commit-config.yaml
CODE_OF_CONDUCT.md
CONTRIBUTING.md
LICENSE
README.md
pyproject.toml
run_profet.ipynb
setup.cfg
setup.py
.github/workflows/python-package.yml
.github/workflows/python-publish.yml
.github/workflows/sphinx.yml
_tests/test_io.py
docs/.nojekyll
docs/Makefile
docs/make.bat
docs/source/api.rst
docs/source/conf.py
docs/source/index.rst
docs/source/installation.rst
docs/source/usage.rst
profet/__init__.py
profet/_version.py
profet/alphafold.py
profet/cache.py
profet/cleaver.py
profet/command_line.py
profet/enums.py
profet/pdb.py
profet/profet.py
profet.egg-info/PKG-INFO
profet.egg-info/SOURCES.txt
profet.egg-info/dependency_links.txt
profet.egg-info/entry_points.txt
profet.egg-info/requires.txt
profet.egg-info/scm_file_list.json
profet.egg-info/scm_version.json
profet.egg-info/top_level.txt
template/database.py