.flake8
.gitignore
LICENSE
README.md
pyproject.toml
setup.py
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/feature_request.md
.github/ISSUE_TEMPLATE/user-story.md
.github/workflows/lint_and_test.yml
.github/workflows/tag_and_publish.yml
demo/demo.py
demo/results-overview.txt
demo/results.csv
demo/data/pred_segmentation.tif
demo/data/pred_swcs.zip
demo/data/target_swcs.zip
doc_template/Makefile
doc_template/make.bat
doc_template/source/conf.py
doc_template/source/index.rst
doc_template/source/_static/dark-logo.svg
doc_template/source/_static/favicon.ico
doc_template/source/_static/light-logo.svg
imgs/labeled_graph.png
imgs/mistakes.png
imgs/pipeline.png
imgs/printouts.png
src/segmentation_skeleton_metrics/__init__.py
src/segmentation_skeleton_metrics/evaluate.py
src/segmentation_skeleton_metrics/skeleton_metrics.py
src/segmentation_skeleton_metrics.egg-info/PKG-INFO
src/segmentation_skeleton_metrics.egg-info/SOURCES.txt
src/segmentation_skeleton_metrics.egg-info/dependency_links.txt
src/segmentation_skeleton_metrics.egg-info/requires.txt
src/segmentation_skeleton_metrics.egg-info/top_level.txt
src/segmentation_skeleton_metrics/data_handling/graph_classes.py
src/segmentation_skeleton_metrics/data_handling/graph_loading.py
src/segmentation_skeleton_metrics/data_handling/swc_loading.py
src/segmentation_skeleton_metrics/utils/graph_util.py
src/segmentation_skeleton_metrics/utils/img_util.py
src/segmentation_skeleton_metrics/utils/util.py