Run id: sample-run
Pipeline: nf-core/rnaseq (revision 3.26.0)
Tasks: 1 (0 failed)
| Check | Status | Value | Expected range | Message |
|---|---|---|---|---|
| alignment_rate:CONTROL_REP1 | PASS | 92.4 | >= 60.0 | CONTROL_REP1: uniquely_mapped_percent=92.4 (pass) |
| assignment_rate:CONTROL_REP1 | PASS | 86.1 | >= 60.0 | CONTROL_REP1: percent_assigned=86.1 (pass) |
| alignment_rate:TREATED_REP1 | PASS | 91.0 | >= 60.0 | TREATED_REP1: uniquely_mapped_percent=91.0 (pass) |
| assignment_rate:TREATED_REP1 | PASS | 84.7 | >= 60.0 | TREATED_REP1: percent_assigned=84.7 (pass) |
| min_sample_count | PASS | 2.0 | >= 2 | 2 sample(s) present (pass) |
| library_size_skew:total_reads | PASS | 1.0469798657718121 | < 3.0 | total_reads max/min ratio across samples = 1.0469798657718121 (pass) |
| Attempt | Failure class | What was patched | Outcome |
|---|---|---|---|
| 1 | oom | resource | patched_and_retried |
| contig | 0.0.1 |
| nextflow | 26.04.4 |
| outdir | /var/folders/8y/bfhvlprd3jx4w827tk12326w0000gp/T/contig-demo-hnbsg5ij/runs/sample-run/results |
| none |
| none |
| multiqc/multiqc_data.json | 1d9153f6ce1f3d0d0982f7f37f5bb2566acfe0b910dbfe6420f601af70045165 |
| star_salmon/salmon.merged.gene_counts.tsv | 857207f06f7549c84ee6082971ca213d88654771fe86371771001ca32b9991f2 |