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examples/neuron_compare/cell/sc_ma2021/run.ipynb
examples/neuron_compare/cell/sc_ma2021/sc.md
examples/neuron_compare/cell/sc_ma2021/sc_braincell.py
examples/neuron_compare/cell/sc_ma2021/sc_neuron.py
examples/neuron_compare/cell/sc_ma2021/debug/__init__.py
examples/neuron_compare/cell/sc_ma2021/debug/convergence_analysis.ipynb
examples/neuron_compare/cell/sc_ma2021/debug/run_debug.ipynb
examples/neuron_compare/cell/sc_ma2021/debug/sc_braincell_debug.py
examples/neuron_compare/cell/sc_ma2021/debug/sc_debug_test.py
examples/neuron_compare/cell/sc_ma2021/debug/sc_neuron_debug.py
examples/neuron_compare/cell/sc_ma2021/debug/sc_parameters.py
examples/neuron_compare/channel_no_conc/README.md
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examples/neuron_compare/channel_no_conc/configs/ma20_goc/cahva_ma20_goc.json
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examples/neuron_compare/channel_no_conc/configs/ma24_pc/cav3p1_ma24_pc.json
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examples/neuron_compare/channel_no_conc/configs/ma24_pc/kca2p2_ma24_pc.json
examples/neuron_compare/channel_no_conc/configs/ma24_pc/kca2p2_ma24_pc_dep_o1.json
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examples/neuron_compare/channel_no_conc/configs/ma24_pc/kir2p3_ma24_pc.json
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examples/neuron_compare/channel_no_conc/configs/ri21_sc/km_ri21_sc.json
examples/neuron_compare/channel_no_conc/configs/ri21_sc/kv1p1_ri21_sc.json
examples/neuron_compare/channel_no_conc/configs/ri21_sc/kv3p4_ri21_sc.json
examples/neuron_compare/channel_no_conc/configs/ri21_sc/kv4p3_ri21_sc.json
examples/neuron_compare/channel_no_conc/configs/ri21_sc/nav1p1_ri21_sc.json
examples/neuron_compare/channel_no_conc/configs/ri21_sc/nav1p6_ri21_sc.json
examples/neuron_compare/channel_no_conc/configs/su15_dcn/cahva_su15_dcn.json
examples/neuron_compare/channel_no_conc/configs/su15_dcn/cal_su15_dcn.json
examples/neuron_compare/channel_no_conc/configs/su15_dcn/calva_su15_dcn.json
examples/neuron_compare/channel_no_conc/configs/su15_dcn/fkdr_su15_dcn.json
examples/neuron_compare/channel_no_conc/configs/su15_dcn/hcn_su15_dcn.json
examples/neuron_compare/channel_no_conc/configs/su15_dcn/naf_su15_dcn.json
examples/neuron_compare/channel_no_conc/configs/su15_dcn/nap_su15_dcn.json
examples/neuron_compare/channel_no_conc/configs/su15_dcn/sk_su15_dcn.json
examples/neuron_compare/channel_no_conc/configs/su15_dcn/skdr_su15_dcn.json
examples/neuron_compare/channel_no_conc/configs/zh19_io/ca_zh19_io.json
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examples/neuron_compare/channel_no_conc/configs/zh19_io/hcn_zh19_io.json
examples/neuron_compare/channel_no_conc/configs/zh19_io/kdr_zh19_io.json
examples/neuron_compare/channel_no_conc/configs/zh19_io/na_zh19_io.json
examples/neuron_compare/channel_no_conc/engine/__init__.py
examples/neuron_compare/channel_no_conc/engine/braincell_runner.py
examples/neuron_compare/channel_no_conc/engine/compare.py
examples/neuron_compare/channel_no_conc/engine/experiment_schema.py
examples/neuron_compare/channel_no_conc/engine/mapping_schema.py
examples/neuron_compare/channel_no_conc/engine/metrics.py
examples/neuron_compare/channel_no_conc/engine/neuron_runner.py
examples/neuron_compare/channel_no_conc/engine/outputs.py
examples/neuron_compare/channel_no_conc/engine/run.py
examples/neuron_compare/channel_no_conc/engine/schema_common.py
examples/neuron_compare/channel_no_conc/engine/solver_diagnose.py
examples/neuron_compare/channel_no_conc/engine/stimulus.py
examples/neuron_compare/channel_no_conc/results/.gitignore
examples/neuron_compare/channel_no_conc/templates/ac.json
examples/neuron_compare/channel_no_conc/templates/dc.json
examples/neuron_compare/channel_no_conc/templates/vinit_celsius.json
examples/neuron_compare/channel_no_conc/tests/__init__.py
examples/neuron_compare/channel_no_conc/tests/_helpers.py
examples/neuron_compare/channel_no_conc/tests/test_braincell_runner.py
examples/neuron_compare/channel_no_conc/tests/test_compare.py
examples/neuron_compare/channel_no_conc/tests/test_dispatch.py
examples/neuron_compare/channel_no_conc/tests/test_experiment_schema.py
examples/neuron_compare/channel_no_conc/tests/test_mapping_schema.py
examples/neuron_compare/channel_no_conc/tests/test_neuron_runner.py
examples/neuron_compare/channel_no_conc/tests/test_outputs.py
examples/neuron_compare/channel_no_conc/tests/test_solver_diagnose.py
examples/neuron_compare/channel_no_conc/tests/test_sweep.py
examples/neuron_compare/channel_no_conc/tests/test_workflow_api.py
examples/neuron_compare/channel_no_conc/workflows/README.md
examples/neuron_compare/channel_no_conc/workflows/batch_workflow.ipynb
examples/neuron_compare/channel_no_conc/workflows/workflow.ipynb
examples/neuron_compare/channel_no_conc/workflows/workflow_api.py
examples/neuron_compare/ion/README.md
examples/neuron_compare/ion/cdpcam_ma2024_pc_stage8g_soma_probe.ipynb
examples/neuron_compare/ion/cdpcam_ma2024_pc_with_cav3p1.ipynb
examples/neuron_compare/ion/cdpcam_ma2024_pc_with_cav3p2.ipynb
examples/neuron_compare/ion/cdpcam_ma2024_pc_zero_ica.ipynb
examples/neuron_compare/ion/cdphva_su2015_dcn_zero_ica.ipynb
examples/neuron_compare/ion/cdpstc_ma2020_goc_with_cahva.ipynb
examples/neuron_compare/ion/cdpstc_ma2020_goc_with_cav2p1_ri21_sc.ipynb
examples/neuron_compare/ion/cdpstc_ma2020_goc_with_cav3p1.ipynb
examples/neuron_compare/ion/cdpstc_ma2020_goc_zero_ica.ipynb
examples/neuron_compare/ion/toy_ca_binding_kinetic_su2015_dcn.ipynb
examples/neuron_compare/ion/toy_ca_binding_source_kinetic_su2015_dcn.ipynb
examples/neuron_compare/ion/toy_ca_pump_factor_with_cahva_su2015_dcn.ipynb
examples/neuron_compare/ion/toy_diam_factor_kinetic_su2015_dcn.ipynb
examples/neuron_compare/morph/neuron_diff.ipynb
examples/neuron_compare/morph/neuron_diff.py
examples/neuron_compare/morph/neuron_diff_test.py
examples/neuron_compare/synapse/exp_syn_compare.ipynb
examples/neuron_compare/synapse/hh_2x2_neuron_compare.ipynb
examples/neuron_compare/synapse/engine/braincell_runner.py
examples/neuron_compare/synapse/engine/neuron_runner.py
examples/single_compartment/SC01_fitting_a_hh_neuron.py
examples/single_compartment/SC02_calcium_activation_functions.py
examples/single_compartment/SC03_COBA_HH_2007_braincell.py
examples/single_compartment/SC04_hh_neuron.py
examples/single_compartment/SC05_thalamus_single_compartment_neurons.py
examples/single_compartment/SC06_unified_thalamus_model.py
examples/single_compartment/SC07_Straital_beta_oscillation_2011.py