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docs/gui-definition-spec/contributing/writing_validation_scripts/writing_validation_scripts.md
examples/A_service_and_entitycore/circuit_simulation/entitysdk_circuit_simulations.ipynb
examples/A_service_and_entitycore/deserialize/deserialize_example.ipynb
examples/A_service_and_entitycore/ion_channel_modeling/ion_channel_modeling_example.ipynb
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examples/C_forms/basic_connectivity_plots/colors_tab10.csv
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examples/C_forms/circuit_simulation/learning_engine_simulations_example.ipynb
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examples/C_forms/synapse_parameterization/circuit_synapse_parameterization.ipynb
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examples/F_single_cell_simulations/entitysdk_memodel_with_synapses_simulation.ipynb
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examples/J_drosophila/drosophila_to_brian2_sonata.py
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examples/J_drosophila_brian2_sonata/_reference_trial.py
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examples/L_utils/register_circuit.ipynb
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projects/circuits_for_explore/connectivity_matrix_extraction.ipynb
projects/circuits_for_explore/folder_compression.ipynb
projects/circuits_for_explore/morphology_containerization.ipynb
projects/circuits_for_explore/nodeset_generator.py
projects/circuits_for_explore/tests/circuit_extraction_test.ipynb
projects/circuits_for_explore/tests/connectivity_matrix_extraction_test.ipynb
projects/circuits_for_explore/tests/folder_compression_test.ipynb
projects/circuits_for_explore/tests/morphology_containerization_dev.ipynb
projects/circuits_for_explore/tests/morphology_containerization_test.ipynb
projects/sim_campaign_upload/__init__.py
projects/sim_campaign_upload/check_sim_campaigns.ipynb
projects/sim_campaign_upload/convert_input_spikes.ipynb
projects/sim_campaign_upload/download_sim_campaigns.ipynb
projects/sim_campaign_upload/register_sim_campaigns.ipynb
projects/sim_campaign_upload/sim_campaign_upload_helpers.py
projects/tiny_circuits/Top10CentralNeurons_Layer_Hex.pkl
projects/tiny_circuits/Top10CentralNeurons_Layer_Hex_OptIDX.pkl
projects/tiny_circuits/check_mod_files.ipynb
projects/tiny_circuits/circuit_extraction.ipynb
projects/tiny_circuits/circuit_extraction_hippocampus.ipynb
projects/tiny_circuits/circuit_extraction_motif.ipynb
projects/tiny_circuits/circuit_extraction_simplex.ipynb
projects/tiny_circuits/circuit_extraction_volumetric.ipynb
projects/tiny_circuits/circuit_simulations.ipynb
projects/tiny_circuits/connectivity_matrix_extraction.ipynb
projects/tiny_circuits/folder_compression.ipynb
projects/tiny_circuits/hippocampus_cylinder_example.ipynb
projects/tiny_circuits/morphology_decontainerization.ipynb
projects/tiny_circuits/patch_circuits.ipynb
projects/tiny_circuits/selection1.csv
projects/tiny_circuits/selection2.csv
projects/tiny_circuits/single_neuron_extraction.ipynb
projects/tiny_circuits/top_nodes_dim6.csv
projects/tiny_circuits/top_rc_nodes_dim2_rc.csv
tests/__init__.py
tests/conftest.py
tests/utils.py
tests/app/__init__.py
tests/app/test_application.py
tests/app/test_auth.py
tests/app/test_callback.py
tests/app/test_dependencies.py
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tests/app/routers/test_root.py
tests/app/routers/declared/__init__.py
tests/app/routers/declared/test_circuit_viz.py
tests/app/routers/declared/test_convert_morphology_to_registered_mesh.py
tests/app/routers/declared/test_mesh_validation.py
tests/app/routers/declared/test_morphology_analysis.py
tests/app/routers/declared/test_morphology_validation.py
tests/app/routers/declared/test_neuron_electrophysiology_metrics.py
tests/app/routers/declared/test_neuron_morphology_calculation.py
tests/app/routers/declared/test_neuron_morphology_metrics.py
tests/app/routers/declared/test_validate_nwb.py
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tests/app/schemas/test_task.py
tests/app/services/__init__.py
tests/app/services/test_accounting.py
tests/app/services/test_circuit_extraction.py
tests/app/services/test_circuit_simulation.py
tests/app/services/test_job.py
tests/app/services/test_morphology.py
tests/app/services/test_morphology_registration.py
tests/app/services/test_task.py
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tests/obi_one/__init__.py
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tests/obi_one/core/test_block_reference.py
tests/obi_one/core/test_deserializable_types.py
tests/obi_one/core/test_deserialization.py
tests/obi_one/core/test_deserialize.py
tests/obi_one/core/test_entity_from_id.py
tests/obi_one/core/test_example.py
tests/obi_one/core/test_exception.py
tests/obi_one/core/test_info.py
tests/obi_one/core/test_order_schema_properties.py
tests/obi_one/core/test_param.py
tests/obi_one/core/test_parametric_multi_values.py
tests/obi_one/core/test_path.py
tests/obi_one/core/test_run_tasks.py
tests/obi_one/core/test_scan_config.py
tests/obi_one/core/test_scan_config_blocks.py
tests/obi_one/core/test_scan_generation.py
tests/obi_one/core/test_single.py
tests/obi_one/core/test_task.py
tests/obi_one/core/test_tuple.py
tests/obi_one/scientific/__init__.py
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tests/obi_one/scientific/blocks/distributions/__init__.py
tests/obi_one/scientific/blocks/distributions/test_distributions.py
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tests/obi_one/scientific/blocks/neuron_sets/test_id.py
tests/obi_one/scientific/blocks/neuron_sets/test_node_set_utils.py
tests/obi_one/scientific/blocks/neuron_sets/test_pair_motif.py
tests/obi_one/scientific/blocks/neuron_sets/test_predefined.py
tests/obi_one/scientific/blocks/neuron_sets/test_property.py
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tests/obi_one/scientific/blocks/stimuli/spike/test_time_distribution_spike_stimuli.py
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tests/obi_one/scientific/tasks/em_synapse_mapping/test_em_synapse_mapping_helpers.py
tests/obi_one/scientific/tasks/em_synapse_mapping/test_register_multiple.py
tests/obi_one/scientific/tasks/em_synapse_mapping/test_resolve_neuron.py
tests/obi_one/scientific/tasks/em_synapse_mapping/test_task.py
tests/obi_one/scientific/tasks/em_synapse_mapping/test_task_multineuron.py
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tests/obi_one/scientific/tasks/folder_compression/__init__.py
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tests/obi_one/scientific/tasks/ion_channel_model_simulation_execution/__init__.py
tests/obi_one/scientific/tasks/ion_channel_model_simulation_execution/test_ion_channel_model_simulation_execution.py
tests/obi_one/scientific/tasks/morphology_containerization/__init__.py
tests/obi_one/scientific/tasks/morphology_containerization/test_morphology_containerization.py
tests/obi_one/scientific/tasks/morphology_containerization/test_morphology_decontainerization.py
tests/obi_one/scientific/tasks/simulation_campaign_generation/__init__.py
tests/obi_one/scientific/tasks/simulation_campaign_generation/test_simulation_campaign_generation.py
tests/obi_one/scientific/tasks/skeletonization/__init__.py
tests/obi_one/scientific/tasks/skeletonization/sphere.glb
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tests/obi_one/scientific/tasks/skeletonization/test_skeletonization.py
tests/obi_one/scientific/unions/__init__.py
tests/obi_one/scientific/unions/test_config_task_map.py
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tests/obi_one/utils/test_benchmark.py
tests/obi_one/utils/test_circuit.py
tests/obi_one/utils/test_circuit_registration.py
tests/obi_one/utils/test_db_sdk.py
tests/obi_one/utils/test_filesystem.py
tests/obi_one/utils/test_io.py
tests/obi_one/utils/test_process.py
tests/obi_one/utils/test_sonata.py
tests/scientific/__init__.py
tests/scientific/blocks/__init__.py
tests/scientific/blocks/stimuli/__init__.py
tests/test_data/S1FL_L5_DBC_cIR_4.nwb
tests/test_data/cell_morphology.asc
tests/test_data/cell_morphology.json
tests/test_data/cell_morphology.swc
tests/test_data/ch150801A1.h5
tests/test_data/ch150801A1.swc
tests/test_data/cube.obj
tests/test_data/electrical_cell_recording.json
tests/test_data/measurement_kinds_ch150801A1_swc.json
tests/test_data/model_dumps/circuit_simulation_single_config_serialization.json
tests/test_data/model_dumps/deprecated_simulation_serialization.json
tests/test_data/model_dumps/grid_scan_simulations_form.json
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tests/ui_schema/__init__.py
tests/ui_schema/test_schema.py
tests/ui_schema/validate_block.py