pyyaml>=6.0
biopython>=1.80
numpy>=1.20
scipy>=1.8
matplotlib>=3.5
defusedxml>=0.7

[dev]
pytest<9,>=8.3
pytest-cov<7,>=5
flake8<8,>=7.1
black<26,>=24.10
mypy<2,>=1.13
types-PyYAML>=6.0.12
hypothesis<7,>=6.168
