LICENSE
README.md
pyproject.toml
docs/pypi.md
src/hgt_site/__init__.py
src/hgt_site/__main__.py
src/hgt_site/alignments.py
src/hgt_site/breakpoints.py
src/hgt_site/call.py
src/hgt_site/cli.py
src/hgt_site/evaluate.py
src/hgt_site/kraken.py
src/hgt_site/prepare.py
src/hgt_site/simulate.py
src/hgt_site/sites.py
src/hgt_site.egg-info/PKG-INFO
src/hgt_site.egg-info/SOURCES.txt
src/hgt_site.egg-info/dependency_links.txt
src/hgt_site.egg-info/entry_points.txt
src/hgt_site.egg-info/requires.txt
src/hgt_site.egg-info/top_level.txt
tests/test_simulated.py
tests/test_units.py