python -m daylily_ec.cli workflow launch --profile lsmc --region us-west-2 --cluster dyec5117 --repository daylily-omics-analysis --analysis-id bcl25b_l003_shard008_cpu_tuned_odirect_on_20260602T000733Z --executing-entity ubuntu --session-name bcl25b_l003_shard008_cpu_tuned_odirect_on_20260602T000733Z --git-tag 2.0.36 --run-context-file docs/plans/20260601T234556Z_bcl_l003_25b_shard_experiment/runs_l003.tsv --dy-command bin/day_run produce_bclconvert_fastqs -p -j 384 -k --config run_context_file=config/runs.tsv bootstrap_bclconvert=true bclconvert='{"barcode_mismatches_index1":"0","barcode_mismatches_index2":"0","compression_threads":"64","conversion_threads":"4","decompression_threads":"32","fastq_gzip_compression_level":"1","force":"true","merge_lane_fastqs":"false","merge_tile_fastqs":"false","num_unknown_barcodes_reported":"1000","output_legacy_stats":"true","parallel_tiles":"24","partition":"i192mem","sample_sheet_settings":"{}","sample_sheet_settings_by_lane":"{}","shared_thread_odirect_output":"true","threads":"192","tile_compression_threads":"8","tile_conversion_threads":"2","tile_decompression_threads":"8","tile_parallel_tiles":"16","tile_shard_lanes":"L003","tile_shard_level":"8","tile_shard_mem_mb":"180000","tile_shard_threads":"48","tmpdir":"/dev/shm"}'
