DAY-EC activated.
DAY-EC activated.
strap workflow" >> /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_fr
om_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/bclc
onvert_validate_inputs.log
            exit 2
        fi
        python workflow/scripts/parse_bclconvert_samplesheet.py \
          --sample-sheet /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/Sa
mpleSheet.csv \
          --samples-tsv /fsx/analysis_results/dyec0602bcl/bcl_l003_8tile_tilesmo
ke_odirect_on_scratch_20260603T080931Z/daylily-omics-analysis/config/samples.tsv
 \
          --normalized-out /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/
fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/n
ormalized.SampleSheet.csv \
          --rows-out /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_
from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/tables/
samplesheet_rows.tsv \
          --runtime-version 4.0.3 \
          --sampleproject-subdirectories false \
          --warnings-out /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fa
sts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/log
s/bclconvert_validate_inputs.warnings.log \
          >> /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bcl
convert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/bclconvert
_validate_inputs.log 2>&1
        touch /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bc
lconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/validated
.ok


[Wed Jun  3 08:21:01 2026]
rule run_bclconvert_tile_shard:
    input: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclco
nvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/validated.ok
, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l00
3_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/normalized.SampleSheet.csv
    output: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclc
onvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/tile_reports/L00
3/0001_tiles0001-0008/bclconvert.done, /fsx/run_dir_mounts/20260514_LH01106_0009
_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_202606
03T080931Z/tile_fastqs/L003/0001_tiles0001-0008/Reports/fastq_list.csv, /fsx/run
_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_ti
lesmoke_odirect_on_scratch_20260603T080931Z/tile_fastqs/L003/0001_tiles0001-0008
/Reports/Demultiplex_Stats.csv, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVL
GLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T0809
31Z/tile_reports/L003/0001_tiles0001-0008/SampleSheet.csv
    log: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconv
ert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/run_bclconvert
.L003.0001_tiles0001-0008.log
    jobid: 4
    benchmark: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_b
clconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/benchmarks/ru
n_bclconvert.L003.0001_tiles0001-0008.bench.tsv
    reason: Missing output files: /fsx/run_dir_mounts/20260514_LH01106_0009_B23T
VLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T08
0931Z/tile_fastqs/L003/0001_tiles0001-0008/Reports/fastq_list.csv, /fsx/run_dir_
mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmo
ke_odirect_on_scratch_20260603T080931Z/tile_reports/L003/0001_tiles0001-0008/bcl
convert.done, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bc
lconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/tile_fastqs/L0
03/0001_tiles0001-0008/Reports/Demultiplex_Stats.csv; Input files updated by ano
ther job: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclcon
vert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/validated.ok,
 /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003
_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/normalized.SampleSheet.csv
    wildcards: lane=L003, shard=0001_tiles0001-0008
    threads: 192
    resources: mem_mb=1200000, mem_mib=1144410, disk_mb=1000, disk_mib=954, tmpd
ir=<TBD>, threads=192, time=5440, partition=i192bigmem, vcpu=192, distribution=b
lock, exclusive=--exclusive, constraint=, exclude=, include=

TMPDIR=/scratch/dayoa_bclconvert_tmp bash workflow/scripts/run_bclconvert_lane.s
h docker://nfcore/bclconvert:4.0.3 /fsx/run_dir_mounts/20260514_LH01106_0009_B23
TVLGLT4 /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconve
rt_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/tile_fastqs/L003/000
1_tiles0001-0008 /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from
_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/normalized.
SampleSheet.csv 3 /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_fro
m_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/tile_repor
ts/L003/0001_tiles0001-0008/SampleSheet.csv false false false 1 24 4 64 32 true
true 1000 '{"BarcodeMismatchesIndex1": "0", "BarcodeMismatchesIndex2": "0"}' '{}
' __dayoa_no_force__ 192 /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fa
sts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/log
s/run_bclconvert.L003.0001_tiles0001-0008.log /fsx/run_dir_mounts/20260514_LH011
06_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch
_20260603T080931Z/tile_fastqs/L003/0001_tiles0001-0008/Reports/fastq_list.csv /f
sx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8t
ile_tilesmoke_odirect_on_scratch_20260603T080931Z/tile_fastqs/L003/0001_tiles000
1-0008/Reports/Demultiplex_Stats.csv /fsx/run_dir_mounts/20260514_LH01106_0009_B
23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603
T080931Z/tile_reports/L003/0001_tiles0001-0008/bclconvert.done s_3_1101+s_3_1102
+s_3_1103+s_3_1104+s_3_1105+s_3_1106+s_3_1107+s_3_1108 /scratch/dayoa_bclconvert
 20000000000

[Wed Jun  3 08:21:01 2026]
rule merge_bclconvert_tile_shards:
    input: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclco
nvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/tile_reports/L003
/0001_tiles0001-0008/bclconvert.done, /fsx/run_dir_mounts/20260514_LH01106_0009_
B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_2026060
3T080931Z/tile_fastqs/L003/0001_tiles0001-0008/Reports/fastq_list.csv, /fsx/run_
dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_til
esmoke_odirect_on_scratch_20260603T080931Z/tile_fastqs/L003/0001_tiles0001-0008/
Reports/Demultiplex_Stats.csv, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLG
LT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T08093
1Z/normalized.SampleSheet.csv
    output: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclc
onvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/lane_reports/L00
3/bclconvert.done, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_fr
om_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/lane_fast
qs/L003/Reports/fastq_list.csv, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVL
GLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T0809
31Z/lane_fastqs/L003/Reports/Demultiplex_Stats.csv, /fsx/run_dir_mounts/20260514
_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_s
cratch_20260603T080931Z/lane_reports/L003/SampleSheet.csv
    log: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconv
ert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/merge_bclconve
rt_tile_shards.L003.log
    jobid: 3
    benchmark: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_b
clconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/benchmarks/me
rge_bclconvert_tile_shards.L003.bench.tsv
    reason: Missing output files: /fsx/run_dir_mounts/20260514_LH01106_0009_B23T
VLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T08
0931Z/lane_reports/L003/bclconvert.done, /fsx/run_dir_mounts/20260514_LH01106_00
09_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_2026
0603T080931Z/lane_fastqs/L003/Reports/fastq_list.csv, /fsx/run_dir_mounts/202605
14_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on
_scratch_20260603T080931Z/lane_reports/L003/SampleSheet.csv, /fsx/run_dir_mounts
/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odi
rect_on_scratch_20260603T080931Z/lane_fastqs/L003/Reports/Demultiplex_Stats.csv;
 Input files updated by another job: /fsx/run_dir_mounts/20260514_LH01106_0009_B
23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603
T080931Z/tile_fastqs/L003/0001_tiles0001-0008/Reports/fastq_list.csv, /fsx/run_d
ir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tile
smoke_odirect_on_scratch_20260603T080931Z/normalized.SampleSheet.csv, /fsx/run_d
ir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tile
smoke_odirect_on_scratch_20260603T080931Z/tile_reports/L003/0001_tiles0001-0008/
bclconvert.done, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from
_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/tile_fastqs
/L003/0001_tiles0001-0008/Reports/Demultiplex_Stats.csv
    wildcards: lane=L003
    resources: mem_mb=3000, mem_mib=2862, disk_mb=1000, disk_mib=954, tmpdir=<TB
D>, threads=1, time=5440, partition=i192bigmem, vcpu=1, distribution=block, excl
usive=, constraint=, exclude=, include=

python workflow/scripts/merge_bclconvert_tile_shards.py --tile-fastq-root /fsx/r
un_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_
tilesmoke_odirect_on_scratch_20260603T080931Z/tile_fastqs --lane-output-dir /fsx
/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8til
e_tilesmoke_odirect_on_scratch_20260603T080931Z/lane_fastqs/L003 --report-dir /f
sx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8t
ile_tilesmoke_odirect_on_scratch_20260603T080931Z/lane_fastqs/L003/Reports --lan
e L003 --shards 0001_tiles0001-0008 --merge-fastqs false --sample-sheet /fsx/run
_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_ti
lesmoke_odirect_on_scratch_20260603T080931Z/normalized.SampleSheet.csv --lane-sa
mple-sheet /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclco
nvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/lane_reports/L003
/SampleSheet.csv --done /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fas
ts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/lane
_reports/L003/bclconvert.done --log /fsx/run_dir_mounts/20260514_LH01106_0009_B2
3TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T
080931Z/logs/merge_bclconvert_tile_shards.L003.log >> /fsx/run_dir_mounts/202605
14_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on
_scratch_20260603T080931Z/logs/merge_bclconvert_tile_shards.L003.log 2>&1 && tes
t -s /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_
l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/lane_fastqs/L003/Report
s/fastq_list.csv && test -s /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4
/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/
lane_fastqs/L003/Reports/Demultiplex_Stats.csv

[Wed Jun  3 08:21:01 2026]
localrule run_bclconvert:
    input: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclco
nvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/validated.ok
, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l00
3_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/normalized.SampleSheet.csv
, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l00
3_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/lane_reports/L003/bclconve
rt.done, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconv
ert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/lane_fastqs/L003/Re
ports/fastq_list.csv, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts
_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/lane_f
astqs/L003/Reports/Demultiplex_Stats.csv, /fsx/run_dir_mounts/20260514_LH01106_0
009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_202
60603T080931Z/lane_reports/L003/SampleSheet.csv
    output: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclc
onvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/bclconvert.
done
    log: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconv
ert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/run_bclconvert
.lane_fastqs_ready.log
    jobid: 2
    benchmark: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_b
clconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/benchmarks/ru
n_bclconvert.lane_fastqs_ready.bench.tsv
    reason: Missing output files: /fsx/run_dir_mounts/20260514_LH01106_0009_B23T
VLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T08
0931Z/logs/bclconvert.done; Input files updated by another job: /fsx/run_dir_mou
nts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_
odirect_on_scratch_20260603T080931Z/lane_reports/L003/bclconvert.done, /fsx/run_
dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_til
esmoke_odirect_on_scratch_20260603T080931Z/logs/validated.ok, /fsx/run_dir_mount
s/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_od
irect_on_scratch_20260603T080931Z/normalized.SampleSheet.csv, /fsx/run_dir_mount
s/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_od
irect_on_scratch_20260603T080931Z/lane_reports/L003/SampleSheet.csv, /fsx/run_di
r_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tiles
moke_odirect_on_scratch_20260603T080931Z/lane_fastqs/L003/Reports/Demultiplex_St
ats.csv, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconv
ert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/lane_fastqs/L003/Re
ports/fastq_list.csv
    resources: mem_mb=3000, mem_mib=2862, disk_mb=1000, disk_mib=954, tmpdir=/sc
ratch/dayoa_bclconvert_tmp, threads=1, time=5440, partition=i192bigmem, vcpu=1,
distribution=block, exclusive=, constraint=, exclude=, include=


            set -euo pipefail
            mkdir -p /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_
from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs
            : > /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_
bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/run_bcl
convert.lane_fastqs_ready.log
            printf 'merge_lane_fastqs=false; lane FASTQs remain under %s for lan
es %s\n' \
              /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bc
lconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/lane_fastqs L0
03 >> /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert
_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/run_bclconvert.la
ne_fastqs_ready.log
            touch /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_fro
m_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/bclco
nvert.done


[Wed Jun  3 08:21:01 2026]
localrule produce_bclconvert_fastqs:
    input: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclco
nvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/validated.ok
, /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l00
3_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/logs/bclconvert.done
    output: /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclc
onvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/fastqs.complete
    log: results/day/hg38/logs/produce_bclconvert_fastqs.log
    jobid: 0
    benchmark: results/day/hg38/benchmarks/produce_bclconvert_fastqs.bench.tsv
    reason: Missing output files: /fsx/run_dir_mounts/20260514_LH01106_0009_B23T
VLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T08
0931Z/fastqs.complete, results/day/hg38/benchmarks/produce_bclconvert_fastqs.ben
ch.tsv; Input files updated by another job: /fsx/run_dir_mounts/20260514_LH01106
_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_2
0260603T080931Z/logs/validated.ok, /fsx/run_dir_mounts/20260514_LH01106_0009_B23
TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_scratch_20260603T0
80931Z/logs/bclconvert.done
    resources: mem_mb=3000, mem_mib=2862, disk_mb=1000, disk_mib=954, tmpdir=/de
v/shm, threads=1, time=5440, partition=i192,i128,i192mem, vcpu=1, distribution=b
lock, exclusive=, constraint=, exclude=, include=

touch /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert
_l003_8tile_tilesmoke_odirect_on_scratch_20260603T080931Z/fastqs.complete
Job stats:
job                             count    min threads    max threads
----------------------------  -------  -------------  -------------
bclconvert_validate_inputs          1              1              1
merge_bclconvert_tile_shards        1              1              1
produce_bclconvert_fastqs           1              1              1
run_bclconvert                      1              1              1
run_bclconvert_tile_shard           1            192            192
total                               5              1            192

Reasons:
    (check individual jobs above for details)
    input files updated by another job:
        merge_bclconvert_tile_shards, produce_bclconvert_fastqs, run_bclconvert,
 run_bclconvert_tile_shard
    missing output files:
        bclconvert_validate_inputs, merge_bclconvert_tile_shards, produce_bclcon
vert_fastqs, run_bclconvert, run_bclconvert_tile_shard

This was a dry-run (flag -n). The order of jobs does not reflect the order of ex
ecution.
RETURN CODE: 0
__DRY_SCRATCH_ODIRECT_RC__0
[Dslu](DAYOA)
