LICENSE
README.md
pyproject.toml
clew/__main__.py
clew/demo.py
clew/providers.py
clew/contracts/__init__.py
clew/contracts/adapter.py
clew/contracts/extractor.py
clew/contracts/registry.py
clew/contracts/trigger.py
clew/data/assertions.json
clew/data/donors.csv
clew/data/gate-policy.example.json
clew/data/graph5.json
clew/data/graph_chain.json
clew/data/graph_da.json
clew/data/graph_rna.json
clew/data/graph_vr.json
clew/data/samplesheets/rnaseq_yeast.csv
clew/data/samplesheets/viralrecon_coguk.csv
clew/extract/__init__.py
clew/extract/digest.py
clew/extract/runs.py
clew/extract/stitch.py
clew/graph/__init__.py
clew/graph/blast_radius.py
clew/graph/contribution.py
clew/graph/graph.py
clew/graph/results.py
clew/graph/s3.py
clew/graph/storage.py
clew/graph/triggers.py
clew/ledger/__init__.py
clew/ledger/bundle.py
clew/ledger/bundlestore.py
clew/ledger/eventlog.py
clew/ledger/evidence.py
clew/ledger/gate.py
clew/ledger/logbook.py
clew/ledger/policy.py
clew/ledger/query.py
clew/ledger/rulebook.py
clew/provider/cromwell/__init__.py
clew/provider/cromwell/extractor_metadata.py
clew/provider/dnanexus/__init__.py
clew/provider/dnanexus/extractor_describe.py
clew/provider/horus/__init__.py
clew/provider/horus/adapter_vina_docking.py
clew/provider/horus/extractor_lineage.py
clew/provider/latch/__init__.py
clew/provider/latch/extractor_execution.py
clew/provider/nextflow/__init__.py
clew/provider/nextflow/adapter.py
clew/provider/nextflow/adapter_rnaseq.py
clew/provider/nextflow/adapter_sarek.py
clew/provider/nextflow/adapter_viralrecon.py
clew/provider/nextflow/extractor_lineage.py
clew/provider/nextflow/extractor_rocrate.py
clew/provider/nextflow/extractor_work.py
clew/provider/snakemake/__init__.py
clew/provider/snakemake/adapter_paths.py
clew/provider/snakemake/extractor_metadata.py
clew/questions/__init__.py
clew/questions/drift.py
clew/questions/gate.py
clew/questions/impact.py
clew/questions/reclaim.py
clew/views/__init__.py
clew/views/dashboard.py
clew/views/drift_report.py
clew/views/fonts.py
clew/views/mcp_server.py
clew/views/reclaim_report.py
clew/views/report.py
clew/views/style.py
clew_lineage.egg-info/PKG-INFO
clew_lineage.egg-info/SOURCES.txt
clew_lineage.egg-info/dependency_links.txt
clew_lineage.egg-info/entry_points.txt
clew_lineage.egg-info/requires.txt
clew_lineage.egg-info/top_level.txt
tests/test_adapter_registry.py
tests/test_blast_radius.py
tests/test_class_hook.py
tests/test_contribution.py
tests/test_core_boundary.py
tests/test_cromwell.py
tests/test_cromwell_contract.py
tests/test_dashboard.py
tests/test_demo.py
tests/test_digest.py
tests/test_dnanexus.py
tests/test_dnanexus_contract.py
tests/test_drift.py
tests/test_drift_store.py
tests/test_eventlog.py
tests/test_eventlog_postgres.py
tests/test_evidence.py
tests/test_extractor.py
tests/test_extractor_registry.py
tests/test_gate.py
tests/test_graph5_regression.py
tests/test_graph_chain_regression.py
tests/test_graph_contract.py
tests/test_graph_rna_regression.py
tests/test_graph_vr_regression.py
tests/test_horus.py
tests/test_horus_contract.py
tests/test_impact_guards.py
tests/test_impact_runs.py
tests/test_latch.py
tests/test_latch_contract.py
tests/test_lineage_store.py
tests/test_mcp_server.py
tests/test_mode.py
tests/test_nextflow_contract.py
tests/test_pantheon_vina.py
tests/test_pending.py
tests/test_plan_cost.py
tests/test_plan_json.py
tests/test_policy.py
tests/test_policy_providers.py
tests/test_providers.py
tests/test_query.py
tests/test_reclaim.py
tests/test_reclaim_s3.py
tests/test_report.py
tests/test_rocrate.py
tests/test_runs.py
tests/test_runs_horus.py
tests/test_runs_store.py
tests/test_sarek.py
tests/test_snakemake.py
tests/test_snakemake_contract.py
tests/test_snakemake_domain.py
tests/test_stitch.py
tests/test_triggers.py
tests/test_workpath.py