# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# C extensions
*.so

# Distribution / packaging
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
*.egg-info/
.installed.cfg
*.egg

# Jupyter Notebook
.ipynb_checkpoints

# Virtual environment
axon_quant_v2/
venv/
env/
ENV/
.venv/

# IDE
.idea/
.vscode/

# OS specific
.DS_Store
*.swp
*~

# Project specific
*.tif
*.TIF
*.tiff
*.TIFF
*.jpg
*.JPG
*.png
*.PNG

# Test directories
# Ignore test data but not test files
tests/**/tests_data/
tests/**/test_data/
tests/**/__pycache__/

# Specific test files to ignore
*.HTD
*.xml
*.csv
tests/integration/tests_data/

# Documentation build files
docs/build/

# Temporary files
*.log
*.tmp

# Keep this section for any future deprecated files

# Planning documents
plans/