[edsnlp_core]
load = edsnlp.core.pipeline:load
optimizer = edsnlp.training.optimizer:ScheduledOptimizer
pipeline = edsnlp.core.pipeline:Pipeline

[edsnlp_factories]
eds.biaffine_dep_parser = edsnlp.pipes.trainable.biaffine_dep_parser.factory:create_component
eds.extractive_qa = edsnlp.pipes.trainable.extractive_qa.factory:create_component
eds.ner_crf = edsnlp.pipes.trainable.ner_crf.factory:create_component
eds.nested_ner = edsnlp.pipes.trainable.ner_crf.factory:create_component
eds.span_classifier = edsnlp.pipes.trainable.span_classifier.factory:create_component
eds.span_linker = edsnlp.pipes.trainable.span_linker.factory:create_component
eds.span_pooler = edsnlp.pipes.trainable.embeddings.span_pooler.factory:create_component
eds.span_qualifier = edsnlp.pipes.trainable.span_classifier.factory:create_component
eds.text_cnn = edsnlp.pipes.trainable.embeddings.text_cnn.factory:create_component
eds.transformer = edsnlp.pipes.trainable.embeddings.transformer.factory:create_component

[edsnlp_loggers]
aim = edsnlp.training.loggers:AimLogger
clearml = edsnlp.training.loggers:ClearMLLogger
cometml = edsnlp.training.loggers:CometMLLogger
csv = edsnlp.training.loggers:CSVLogger
dvclive = edsnlp.training.loggers:DVCLiveLogger
json = edsnlp.training.loggers:JSONLogger
mlflow = edsnlp.training.loggers:MLflowLogger
rich = edsnlp.training.loggers:RichLogger
tensorboard = edsnlp.training.loggers:TensorBoardLogger
wandb = edsnlp.training.loggers:WandBLogger

[edsnlp_readers]
brat = edsnlp.data:read_brat
conll = edsnlp.data:read_conll
huggingface_dataset = edsnlp.data:from_huggingface_dataset
json = edsnlp.data:read_json
pandas = edsnlp.data:from_pandas
parquet = edsnlp.data:read_parquet
polars = edsnlp.data:from_polars
spark = edsnlp.data:from_spark
standoff = edsnlp.data:read_standoff

[edsnlp_schedules]
linear = edsnlp.training.optimizer:LinearSchedule

[edsnlp_writers]
brat = edsnlp.data:write_brat
huggingface_dataset = edsnlp.data:to_huggingface_dataset
json = edsnlp.data:write_json
pandas = edsnlp.data:to_pandas
parquet = edsnlp.data:write_parquet
polars = edsnlp.data:to_polars
spark = edsnlp.data:to_spark
standoff = edsnlp.data:write_standoff

[spacy_factories]
SOFA = edsnlp.pipes.ner.scores.sofa.factory:create_component
accents = edsnlp.pipes.core.normalizer.accents.factory:create_component
charlson = edsnlp.pipes.ner.scores.charlson.factory:create_component
consultation_dates = edsnlp.pipes.misc.consultation_dates.factory:create_component
contextual-matcher = edsnlp.pipes.core.contextual_matcher.factory:create_component
dates = edsnlp.pipes.misc.dates.factory:create_component
eds.AIDS = edsnlp.pipes.ner.disorders.aids.factory:create_component
eds.CKD = edsnlp.pipes.ner.disorders.ckd.factory:create_component
eds.COPD = edsnlp.pipes.ner.disorders.copd.factory:create_component
eds.SOFA = edsnlp.pipes.ner.scores.sofa.factory:create_component
eds.TNM = edsnlp.pipes.ner.tnm.factory:create_component
eds.accents = edsnlp.pipes.core.normalizer.accents.factory:create_component
eds.adicap = edsnlp.pipes.ner.adicap.factory:create_component
eds.aids = edsnlp.pipes.ner.disorders.aids.factory:create_component
eds.alcohol = edsnlp.pipes.ner.behaviors.alcohol.factory:create_component
eds.cerebrovascular_accident = edsnlp.pipes.ner.disorders.cerebrovascular_accident.factory:create_component
eds.charlson = edsnlp.pipes.ner.scores.charlson.factory:create_component
eds.cim10 = edsnlp.pipes.ner.cim10.factory:create_component
eds.ckd = edsnlp.pipes.ner.disorders.ckd.factory:create_component
eds.congestive_heart_failure = edsnlp.pipes.ner.disorders.congestive_heart_failure.factory:create_component
eds.conll_dict2doc = edsnlp.data.converters:ConllDict2DocConverter
eds.connective_tissue_disease = edsnlp.pipes.ner.disorders.connective_tissue_disease.factory:create_component
eds.consultation_dates = edsnlp.pipes.misc.consultation_dates.factory:create_component
eds.contextual-matcher = edsnlp.pipes.core.contextual_matcher.factory:create_component
eds.contextual_matcher = edsnlp.pipes.core.contextual_matcher.factory:create_component
eds.copd = edsnlp.pipes.ner.disorders.copd.factory:create_component
eds.covid = edsnlp.pipes.ner.covid.factory:create_component
eds.dates = edsnlp.pipes.misc.dates.factory:create_component
eds.dementia = edsnlp.pipes.ner.disorders.dementia.factory:create_component
eds.diabetes = edsnlp.pipes.ner.disorders.diabetes.factory:create_component
eds.drugs = edsnlp.pipes.ner.drugs.factory:create_component
eds.elston-ellis = edsnlp.pipes.ner.scores.elston_ellis.factory:create_component
eds.elston_ellis = edsnlp.pipes.ner.scores.elston_ellis.factory:create_component
eds.elstonellis = edsnlp.pipes.ner.scores.elston_ellis.factory:create_component
eds.emergency.ccmu = edsnlp.pipes.ner.scores.emergency.ccmu.factory:create_component
eds.emergency.gemsa = edsnlp.pipes.ner.scores.emergency.gemsa.factory:create_component
eds.emergency.priority = edsnlp.pipes.ner.scores.emergency.priority.factory:create_component
eds.emergency_ccmu = edsnlp.pipes.ner.scores.emergency.ccmu.factory:create_component
eds.emergency_gemsa = edsnlp.pipes.ner.scores.emergency.gemsa.factory:create_component
eds.emergency_priority = edsnlp.pipes.ner.scores.emergency.priority.factory:create_component
eds.endlines = edsnlp.pipes.core.endlines.factory:create_component
eds.ents_doc2dict = edsnlp.data.converters:EntsDoc2DictConverter
eds.explode = edsnlp.pipes.misc.explode.explode:Explode
eds.family = edsnlp.pipes.qualifiers.family.factory:create_component
eds.hemiplegia = edsnlp.pipes.ner.disorders.hemiplegia.factory:create_component
eds.history = edsnlp.pipes.qualifiers.history.factory:create_component
eds.hypothesis = edsnlp.pipes.qualifiers.hypothesis.factory:create_component
eds.leukemia = edsnlp.pipes.ner.disorders.leukemia.factory:create_component
eds.liver_disease = edsnlp.pipes.ner.disorders.liver_disease.factory:create_component
eds.llm_markup_extractor = edsnlp.pipes.llm.llm_markup_extractor.factory:create_component
eds.llm_span_qualifier = edsnlp.pipes.llm.llm_span_qualifier.factory:create_component
eds.lymphoma = edsnlp.pipes.ner.disorders.lymphoma.factory:create_component
eds.markup_to_doc = edsnlp.data.converters:MarkupToDocConverter
eds.matcher = edsnlp.pipes.core.matcher.factory:create_component
eds.measurements = edsnlp.pipes.misc.quantities.factory:create_component
eds.measures = edsnlp.pipes.misc.quantities.factory:create_component
eds.myocardial_infarction = edsnlp.pipes.ner.disorders.myocardial_infarction.factory:create_component
eds.negation = edsnlp.pipes.qualifiers.negation.factory:create_component
eds.normalizer = edsnlp.pipes.core.normalizer.factory:create_component
eds.omop_dict2doc = edsnlp.data.converters:OmopDict2DocConverter
eds.omop_doc2dict = edsnlp.data.converters:OmopDoc2DictConverter
eds.peptic_ulcer_disease = edsnlp.pipes.ner.disorders.peptic_ulcer_disease.factory:create_component
eds.peripheral_vascular_disease = edsnlp.pipes.ner.disorders.peripheral_vascular_disease.factory:create_component
eds.pollution = edsnlp.pipes.core.normalizer.pollution.factory:create_component
eds.quantities = edsnlp.pipes.misc.quantities.factory:create_component
eds.quotes = edsnlp.pipes.core.normalizer.quotes.factory:create_component
eds.reason = edsnlp.pipes.misc.reason.factory:create_component
eds.remove-lowercase = edsnlp.pipes.core.normalizer.remove_lowercase.factory:create_component
eds.remove_lowercase = edsnlp.pipes.core.normalizer.remove_lowercase.factory:create_component
eds.reported_speech = edsnlp.pipes.qualifiers.reported_speech.factory:create_component
eds.score = edsnlp.pipes.ner.scores.factory:create_component
eds.sections = edsnlp.pipes.misc.sections.factory:create_component
eds.sentences = edsnlp.pipes.core.sentences.factory:create_component
eds.sofa = edsnlp.pipes.ner.scores.sofa.factory:create_component
eds.solid_tumor = edsnlp.pipes.ner.disorders.solid_tumor.factory:create_component
eds.spaces = edsnlp.pipes.core.normalizer.spaces.factory:create_component
eds.split = edsnlp.pipes.misc.split.split:Split
eds.standoff_dict2doc = edsnlp.data.converters:StandoffDict2DocConverter
eds.standoff_doc2dict = edsnlp.data.converters:StandoffDoc2DictConverter
eds.suicide_attempt = edsnlp.pipes.ner.suicide_attempt.factory:create_component
eds.tables = edsnlp.pipes.misc.tables.factory:create_component
eds.terminology = edsnlp.pipes.core.terminology.factory:create_component
eds.tnm = edsnlp.pipes.ner.tnm.factory:create_component
eds.tobacco = edsnlp.pipes.ner.behaviors.tobacco.factory:create_component
eds.umls = edsnlp.pipes.ner.umls.factory:create_component
emergency.ccmu = edsnlp.pipes.ner.scores.emergency.ccmu.factory:create_component
emergency.gemsa = edsnlp.pipes.ner.scores.emergency.gemsa.factory:create_component
emergency.priority = edsnlp.pipes.ner.scores.emergency.priority.factory:create_component
endlines = edsnlp.pipes.core.endlines.factory:create_component
family = edsnlp.pipes.qualifiers.family.factory:create_component
hypothesis = edsnlp.pipes.qualifiers.hypothesis.factory:create_component
matcher = edsnlp.pipes.core.matcher.factory:create_component
negation = edsnlp.pipes.qualifiers.negation.factory:create_component
normalizer = edsnlp.pipes.core.normalizer.factory:create_component
pollution = edsnlp.pipes.core.normalizer.pollution.factory:create_component
quotes = edsnlp.pipes.core.normalizer.quotes.factory:create_component
reason = edsnlp.pipes.misc.reason.factory:create_component
remove-lowercase = edsnlp.pipes.core.normalizer.remove_lowercase.factory:create_component
reported_speech = edsnlp.pipes.qualifiers.reported_speech.factory:create_component
rspeech = edsnlp.pipes.qualifiers.reported_speech.factory:create_component
score = edsnlp.pipes.ner.scores.factory:create_component
sections = edsnlp.pipes.misc.sections.factory:create_component
sentences = edsnlp.pipes.core.sentences.factory:create_component
spaces = edsnlp.pipes.core.normalizer.spaces.factory:create_component
tables = edsnlp.pipes.misc.tables.factory:create_component
terminology = edsnlp.pipes.core.terminology.factory:create_component

[spacy_languages]
eds = edsnlp.language:EDSLanguage

[spacy_misc]
eds.span_context_getter = edsnlp.utils.span_getters:make_span_context_getter

[spacy_scorers]
eds.dep_parsing = edsnlp.metrics.dep_parsing:DependencyParsingMetric
eds.ner_exact = edsnlp.metrics.ner:NerExactMetric
eds.ner_exact_metric = edsnlp.metrics.ner:NerExactMetric
eds.ner_exact_scorer = edsnlp.metrics.ner:NerExactMetric
eds.ner_overlap = edsnlp.metrics.ner:NerOverlapMetric
eds.ner_overlap_metric = edsnlp.metrics.ner:NerOverlapMetric
eds.ner_overlap_scorer = edsnlp.metrics.ner:NerOverlapMetric
eds.ner_token = edsnlp.metrics.ner:NerTokenMetric
eds.ner_token_metric = edsnlp.metrics.ner:NerTokenMetric
eds.ner_token_scorer = edsnlp.metrics.ner:NerTokenMetric
eds.span_attribute = edsnlp.metrics.span_attribute:SpanAttributeMetric
eds.span_attributes = edsnlp.metrics.span_attribute:SpanAttributeMetric
eds.span_attributes_metric = edsnlp.metrics.span_attributes:SpanAttributeMetric
eds.span_attributes_scorer = edsnlp.metrics.span_attributes:SpanAttributeMetric

[spacy_tokenizers]
eds.tokenizer = edsnlp.language:create_eds_tokenizer
