LICENSE
README.md
pyproject.toml
clifpy/__init__.py
clifpy/clif_orchestrator.py
clifpy.egg-info/PKG-INFO
clifpy.egg-info/SOURCES.txt
clifpy.egg-info/dependency_links.txt
clifpy.egg-info/requires.txt
clifpy.egg-info/top_level.txt
clifpy/data/__init__.py
clifpy/data/loader.py
clifpy/data/mdro.yaml
clifpy/data/clif_demo/clif_adt.parquet
clifpy/data/clif_demo/clif_code_status.parquet
clifpy/data/clif_demo/clif_crrt_therapy.parquet
clifpy/data/clif_demo/clif_hospital_diagnosis.parquet
clifpy/data/clif_demo/clif_hospitalization.parquet
clifpy/data/clif_demo/clif_labs.parquet
clifpy/data/clif_demo/clif_medication_admin_continuous.parquet
clifpy/data/clif_demo/clif_medication_admin_intermittent.parquet
clifpy/data/clif_demo/clif_patient.parquet
clifpy/data/clif_demo/clif_patient_assessments.parquet
clifpy/data/clif_demo/clif_patient_procedures.parquet
clifpy/data/clif_demo/clif_position.parquet
clifpy/data/clif_demo/clif_respiratory_support.parquet
clifpy/data/clif_demo/clif_vitals.parquet
clifpy/data/comorbidity/cci.yaml
clifpy/data/comorbidity/elixhauser.yaml
clifpy/schemas/__init__.py
clifpy/schemas/outlier_config.yaml
clifpy/schemas/validation_rules.yaml
clifpy/schemas/wide_tables_config.yaml
clifpy/schemas/2.1/adt_schema.yaml
clifpy/schemas/2.1/code_status_schema.yaml
clifpy/schemas/2.1/crrt_therapy_schema.yaml
clifpy/schemas/2.1/ecmo_mcs_schema.yaml
clifpy/schemas/2.1/hospital_diagnosis_schema.yaml
clifpy/schemas/2.1/hospitalization_schema.yaml
clifpy/schemas/2.1/labs_schema.yaml
clifpy/schemas/2.1/medication_admin_continuous_schema.yaml
clifpy/schemas/2.1/medication_admin_intermittent_schema.yaml
clifpy/schemas/2.1/microbiology_culture_schema.yaml
clifpy/schemas/2.1/microbiology_nonculture_schema.yaml
clifpy/schemas/2.1/microbiology_susceptibility_schema.yaml
clifpy/schemas/2.1/patient_assessments_schema.yaml
clifpy/schemas/2.1/patient_procedures_schema.yaml
clifpy/schemas/2.1/patient_schema.yaml
clifpy/schemas/2.1/position_schema.yaml
clifpy/schemas/2.1/respiratory_support_schema.yaml
clifpy/schemas/2.1/vitals_schema.yaml
clifpy/schemas/3.0/adt_schema.yaml
clifpy/schemas/3.0/airway_schema.yaml
clifpy/schemas/3.0/clinical_notes_facts_schema.yaml
clifpy/schemas/3.0/clinical_notes_text_schema.yaml
clifpy/schemas/3.0/clinical_trial_schema.yaml
clifpy/schemas/3.0/code_status_schema.yaml
clifpy/schemas/3.0/crrt_therapy_schema.yaml
clifpy/schemas/3.0/drain_schema.yaml
clifpy/schemas/3.0/ed_encounter_schema.yaml
clifpy/schemas/3.0/hospital_diagnosis_schema.yaml
clifpy/schemas/3.0/hospitalization_schema.yaml
clifpy/schemas/3.0/input_schema.yaml
clifpy/schemas/3.0/intermittent_dialysis_schema.yaml
clifpy/schemas/3.0/invasive_hemodynamics_schema.yaml
clifpy/schemas/3.0/key_icu_orders_schema.yaml
clifpy/schemas/3.0/labs_schema.yaml
clifpy/schemas/3.0/line_schema.yaml
clifpy/schemas/3.0/mcs_schema.yaml
clifpy/schemas/3.0/medication_admin_continuous_schema.yaml
clifpy/schemas/3.0/medication_admin_intermittent_schema.yaml
clifpy/schemas/3.0/medication_orders_schema.yaml
clifpy/schemas/3.0/microbiology_culture_schema.yaml
clifpy/schemas/3.0/microbiology_nonculture_schema.yaml
clifpy/schemas/3.0/microbiology_susceptibility_schema.yaml
clifpy/schemas/3.0/model_registry_schema.yaml
clifpy/schemas/3.0/output_schema.yaml
clifpy/schemas/3.0/patient_assessments_schema.yaml
clifpy/schemas/3.0/patient_attributes_schema.yaml
clifpy/schemas/3.0/patient_diagnosis_schema.yaml
clifpy/schemas/3.0/patient_procedures_schema.yaml
clifpy/schemas/3.0/patient_schema.yaml
clifpy/schemas/3.0/place_based_index_schema.yaml
clifpy/schemas/3.0/position_schema.yaml
clifpy/schemas/3.0/provider_schema.yaml
clifpy/schemas/3.0/radiology_schema.yaml
clifpy/schemas/3.0/respiratory_support_schema.yaml
clifpy/schemas/3.0/scores_schema.yaml
clifpy/schemas/3.0/therapy_details_schema.yaml
clifpy/schemas/3.0/transfusion_schema.yaml
clifpy/schemas/3.0/validated_diagnosis_schema.yaml
clifpy/schemas/3.0/vitals_schema.yaml
clifpy/schemas/crosswalks/clif_2.1_to_3.0.yaml
clifpy/tables/__init__.py
clifpy/tables/adt.py
clifpy/tables/base_table.py
clifpy/tables/code_status.py
clifpy/tables/crrt_therapy.py
clifpy/tables/ecmo_mcs.py
clifpy/tables/hospital_diagnosis.py
clifpy/tables/hospitalization.py
clifpy/tables/labs.py
clifpy/tables/medication_admin_continuous.py
clifpy/tables/medication_admin_intermittent.py
clifpy/tables/microbiology_culture.py
clifpy/tables/microbiology_nonculture.py
clifpy/tables/microbiology_susceptibility.py
clifpy/tables/patient.py
clifpy/tables/patient_assessments.py
clifpy/tables/patient_procedures.py
clifpy/tables/position.py
clifpy/tables/respiratory_support.py
clifpy/tables/vitals.py
clifpy/utils/__init__.py
clifpy/utils/ase.py
clifpy/utils/comorbidity.py
clifpy/utils/config.py
clifpy/utils/crosswalk.py
clifpy/utils/datetime_polars.py
clifpy/utils/io.py
clifpy/utils/io_polars.py
clifpy/utils/logging_config.py
clifpy/utils/mdro_flags.py
clifpy/utils/migrate_versions_2_1_to_3.py
clifpy/utils/outlier_handler.py
clifpy/utils/query.py
clifpy/utils/report_generator.py
clifpy/utils/rule_codes.py
clifpy/utils/sofa.py
clifpy/utils/sofa_polars.py
clifpy/utils/stitching_encounters.py
clifpy/utils/unit_converter.py
clifpy/utils/validator.py
clifpy/utils/waterfall.py
clifpy/utils/wide_dataset.py
tests/test_crosswalk.py
tests/test_new_tables.py