AlphaFold Sovereign MCP
Copyright 2024-2026 Santiago Maniches and TOPOLOGICA LLC

This product includes software developed by
TOPOLOGICA LLC (https://topologica.ai).

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Patent Notice
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This product includes implementations of patent-pending innovations
authored by Santiago Maniches (ORCID: 0009-0005-6480-1987):

  - Drift tensor correction framework
  - Topological fingerprinting of protein structures via
    persistent homology over Vietoris-Rips filtrations

These patent rights are licensed to users of this Apache 2.0
distribution under the terms of Apache License, Version 2.0,
Section 3 ("Grant of Patent License"), strictly for the purposes
of using, modifying, and distributing this Work.

Patent rights for use outside this Work — including embedding the
patented methods in derivative or competing products that do not
incorporate this Work — are reserved. See PATENTS.md for details
and inquiries.

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Third-Party Components
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This product makes use of third-party components, each governed by
its own license. A full inventory is published with every release in
the form of CycloneDX and SPDX Software Bills of Materials (SBOMs).

Notable upstream data sources accessed at runtime (no code included):
  - AlphaFold Protein Structure Database
      (DeepMind / EMBL-EBI; CC BY 4.0 for predicted structures)
  - UniProt (CC BY 4.0)
  - Gene Ontology (CC BY 4.0)
  - InterPro / Pfam (CC0)
  - RCSB Protein Data Bank (CC0)

Users are responsible for complying with the terms of any upstream
data sources they access through this software.
