# Autogenerated by alphashared workflow. Do not edit manually! Last update: 2026-07-30_12-34-24
alphabase==1.9.0
alphadia-search-rs==1.1.1
alpharaw==0.6.1
argparse==1.4.0
backports-zstd==1.6.0
biopython==1.87
certifi==2026.7.22
cffi==2.1.0
charset-normalizer==3.4.9
click==8.4.2
clr-loader==0.3.1
contextlib2==21.6.0
contourpy==1.3.3
cycler==0.12.1
dill==0.4.1
directlfq==0.3.3
et-xmlfile==2.0.0
filelock==3.32.2
fonttools==4.63.0
fsspec==2026.7.0
h5py==3.16.0
hf-xet==1.5.2
huggingface-hub==0.36.2
idna==3.18
jinja2==3.1.6
joblib==1.5.3
kiwisolver==1.5.0
lightning-utilities==0.15.3
llvmlite==0.48.0
lxml==6.1.1
markupsafe==3.0.3
matplotlib==3.11.1
mpmath==1.3.0
multiprocess==0.70.19
narwhals==2.24.0
networkx==3.6.1
numba==0.66.0
numpy==1.26.4
nvidia-cublas-cu12==12.4.5.8  ; sys_platform == 'linux'
nvidia-cuda-cupti-cu12==12.4.127  ; sys_platform == 'linux'
nvidia-cuda-nvrtc-cu12==12.4.127  ; sys_platform == 'linux'
nvidia-cuda-runtime-cu12==12.4.127  ; sys_platform == 'linux'
nvidia-cudnn-cu12==9.1.0.70  ; sys_platform == 'linux'
nvidia-cufft-cu12==11.2.1.3  ; sys_platform == 'linux'
nvidia-curand-cu12==10.3.5.147  ; sys_platform == 'linux'
nvidia-cusolver-cu12==11.6.1.9  ; sys_platform == 'linux'
nvidia-cusparse-cu12==12.3.1.170  ; sys_platform == 'linux'
nvidia-cusparselt-cu12==0.6.2  ; sys_platform == 'linux'
nvidia-nccl-cu12==2.21.5  ; sys_platform == 'linux'
nvidia-nvjitlink-cu12==12.4.127  ; sys_platform == 'linux'
nvidia-nvtx-cu12==12.4.127  ; sys_platform == 'linux'
openpyxl==3.1.5
packaging==26.2
pandas==2.3.3
peptdeep==1.5.1
pillow==12.3.0
plotly==6.9.0
psutil==7.2.2
pyahocorasick==2.3.1
pyarrow==25.0.0
pycparser==3.0
pyparsing==3.3.2
pyteomics==5.0.1
python-dateutil==2.9.0.post0
pythonnet==3.1.0
pytz==2026.3.post1
pyyaml==6.0.3
pyzstd==0.19.1
quantselect==0.1.3
rdkit==2026.3.4
regex==2026.7.19
requests==2.34.2
rocket-fft==0.3.1
safetensors==0.8.0
scikit-learn==1.9.0
scipy==1.12.0
seaborn==0.13.2
six==1.17.0
sympy==1.13.1
threadpoolctl==3.6.0
tokenizers==0.22.2
torch==2.6.0
torchmetrics==1.9.0
tqdm==4.70.0
transformers==4.57.6
triton==3.2.0  ; sys_platform == 'linux'
typing-extensions==4.16.0
tzdata==2026.3
urllib3==2.7.0
xxhash==3.8.1
