LICENSE
LICENSES_THIRD_PARTY
MANIFEST.in
README.md
pyproject.toml
setup.py
./plantbgc/README.md
./plantbgc/__init__.py
./plantbgc/__version__.py
./plantbgc/data.py
./plantbgc/features.py
./plantbgc/main.py
./plantbgc/try.py
./plantbgc/util.py
./plantbgc/command/__init__.py
./plantbgc/command/base.py
./plantbgc/command/download.py
./plantbgc/command/info.py
./plantbgc/command/pipeline.py
./plantbgc/command/prepare.py
./plantbgc/command/train.py
./plantbgc/data/GeneSwap_Negatives.pfam.tsv
./plantbgc/data/MIBiG.pfam.tsv
./plantbgc/data/pfam2vec.csv
./plantbgc/data/plantbgc.json
./plantbgc/models/__init__.py
./plantbgc/models/hmm.py
./plantbgc/models/random_forest.py
./plantbgc/models/rnn.py
./plantbgc/models/rnn_patched.py
./plantbgc/models/transformer.py
./plantbgc/models/transformer_layers.py
./plantbgc/models/transformer_layers_fixed.py
./plantbgc/models/transformer_layers_patched.py
./plantbgc/models/transformer_stage1_my.json
./plantbgc/models/transformer_stage1_my.py
./plantbgc/models/transformer_stage1_my_patched.py
./plantbgc/models/wrapper.py
./plantbgc/output/__init__.py
./plantbgc/output/antismash_json.py
./plantbgc/output/bgc_genbank.py
./plantbgc/output/cluster_tsv.py
./plantbgc/output/genbank.py
./plantbgc/output/pfam_tsv.py
./plantbgc/output/readme.py
./plantbgc/output/writer.py
./plantbgc/output/evaluation/__init__.py
./plantbgc/output/evaluation/bgc_region_plot.py
./plantbgc/output/evaluation/pfam_score_plot.py
./plantbgc/output/evaluation/pr_plot.py
./plantbgc/output/evaluation/roc_plot.py
./plantbgc/pipeline/__init__.py
./plantbgc/pipeline/annotator.py
./plantbgc/pipeline/classifier.py
./plantbgc/pipeline/data
./plantbgc/pipeline/detector.py
./plantbgc/pipeline/pfam.py
./plantbgc/pipeline/protein.py
./plantbgc/pipeline/step.py
plantbgc/README.md
plantbgc/__init__.py
plantbgc/__version__.py
plantbgc/data.py
plantbgc/features.py
plantbgc/main.py
plantbgc/try.py
plantbgc/util.py
plantbgc/command/__init__.py
plantbgc/command/base.py
plantbgc/command/download.py
plantbgc/command/info.py
plantbgc/command/pipeline.py
plantbgc/command/prepare.py
plantbgc/command/train.py
plantbgc/data/GeneSwap_Negatives.pfam.tsv
plantbgc/data/MIBiG.pfam.tsv
plantbgc/data/pfam2vec.csv
plantbgc/data/plantbgc.json
plantbgc/models/__init__.py
plantbgc/models/hmm.py
plantbgc/models/random_forest.py
plantbgc/models/rnn.py
plantbgc/models/rnn_patched.py
plantbgc/models/transformer.py
plantbgc/models/transformer_layers.py
plantbgc/models/transformer_layers_fixed.py
plantbgc/models/transformer_layers_patched.py
plantbgc/models/transformer_stage1_my.json
plantbgc/models/transformer_stage1_my.py
plantbgc/models/transformer_stage1_my_patched.py
plantbgc/models/wrapper.py
plantbgc/output/__init__.py
plantbgc/output/antismash_json.py
plantbgc/output/bgc_genbank.py
plantbgc/output/cluster_tsv.py
plantbgc/output/genbank.py
plantbgc/output/pfam_tsv.py
plantbgc/output/readme.py
plantbgc/output/writer.py
plantbgc/output/evaluation/__init__.py
plantbgc/output/evaluation/bgc_region_plot.py
plantbgc/output/evaluation/pfam_score_plot.py
plantbgc/output/evaluation/pr_plot.py
plantbgc/output/evaluation/roc_plot.py
plantbgc/pipeline/__init__.py
plantbgc/pipeline/annotator.py
plantbgc/pipeline/classifier.py
plantbgc/pipeline/data
plantbgc/pipeline/detector.py
plantbgc/pipeline/pfam.py
plantbgc/pipeline/protein.py
plantbgc/pipeline/step.py
plantbgc_demo.egg-info/PKG-INFO
plantbgc_demo.egg-info/SOURCES.txt
plantbgc_demo.egg-info/dependency_links.txt
plantbgc_demo.egg-info/entry_points.txt
plantbgc_demo.egg-info/requires.txt
plantbgc_demo.egg-info/top_level.txt