rxnfit

Contents:

  • rxnfit.rxn_reader module
  • rxnfit.build_ode module
  • rxnfit.rate_const_ft_eval module
  • rxnfit.solv_ode module
  • rxnfit.expdata_reader module
  • rxnfit.expdata_fit module
  • rxnfit.p0_opt_fit module
  • rxnfit.fit_metrics module
  • rxnfit.plot_results module
  • rxnfit.solver_backend module
  • rxnfit.lsoda_p_vector module
  • rxnfit.numbalsoda_rhs module
rxnfit
  • src
  • View page source

src

  • rxnfit package
    • Submodules
      • rxnfit.build_ode module
        • RxnODEbuild
        • create_system_rhs()
      • rxnfit.expdata_fit module
        • ExpDataFit
        • run_fit_multi()
        • solve_fit_model()
        • solve_fit_model_multi()
      • rxnfit.expdata_reader module
        • align_expdata_to_function_names()
        • expdata_read()
        • get_t0_from_expdata()
        • get_time_unit_from_expdata()
        • get_y0_from_expdata()
        • time_course()
      • rxnfit.fit_metrics module
        • expdata_df_to_datasets()
        • fit_metrics()
      • rxnfit.lsoda_p_vector module
        • build_lsoda_parameter_vector_p()
      • rxnfit.numbalsoda_rhs module
        • compile_numbalsoda_rhs_for_builder()
      • rxnfit.p0_opt_fit module
        • P0OptFit
      • rxnfit.plot_results module
        • plot_time_course_solutions()
      • rxnfit.rate_const_ft_eval module
        • build_evaluator()
        • has_time_dependent_rates()
      • rxnfit.rxn_reader module
        • RxnToODE
        • generate_ode()
        • generate_sys_ode()
        • get_reactions()
        • get_unique_species()
        • rate_constants()
        • reactant_consumption()
        • to_chempy_style()
      • rxnfit.solv_ode module
        • RxnODEsolver
        • SolverConfig
      • rxnfit.solver_backend module
        • LsodaImplicitTEvalMode
        • build_t_eval_when_none_for_lsoda()
        • solve_ode()
    • Module contents

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