from within directory with 'setup.py':



package documentation in './docs/html' has been build with 'sphinx', 
    using extensions 'sphinx-autoapi', 'furo':

    cd docs
    make html


package has been build with:

    python3 -m build

based on:
    pyproject.toml
    MANIFEST.in
    setup.py (empty)


INSTALLATION:
    cd to folder with virtual environments
    create environment 1 (env1) with module venv
        bash-5.2$ python3 -m venv env1
    activate env1
        bash-5.2$ source env1/bin/activate
        (env1) bash-5.2$
        
    extract dist/package
        (env1) bash-5.2$ tar -xvzf /<path_to>/coalispr-$VERSION.tar.gz
        (env1) bash-5.2$ cd coalispr-$VERSION

    install with:
        (env1) bash-5.2$ python3 -m pip install --editable .
        (env1) bash-5.2$ ln -s -r coalispr/resources/numeric.py \
            -t <path to>/env1/lib/python3.1x/site-packages/pandas/core/indexes/
    run:
        (env1) bash-5.2$ coalispr -h
        (env1) bash-5.2$ coalispr_gui
        
    stop:
        (env1) bash-5.2$ deactivate
        bash-5.2$



The following dependencies were installed by pip:

for coalispr:
    numpy
    pandas
    matplotlib
    seaborn
    pysam
for coalispr_gui:
    darkdetect 
    ttkbootstrap

for matplotlib:
    typing-extensions
    contourpy
    cycler
    fonttools
    kiwisolver
    packaging
    pillow
    pyparsing
    python-dateutil
    six
for matplotlib backend QtAgg:
    PyQt6-Qt6, PyQt6-sip, PyQt6

for pandas:
    pytz
    tzdata

for pysam:
    cython

for python-dateutil:
    six


For using system-wide installed dependencies, use:
    bash-5.2$ pip install --no-deps --editable .
