.gitignore
LICENSE
MANIFEST.in
README.md
config.yaml.example
requirements.txt
setup.py
docs/api_setup.md
docs/assistant_reading_feature.md
docs/directory_structure.md
docs/paper_skill.md
docs/project_summary.md
docs/refactor_guide.md
docs/refactor_paths.md
docs/usage_examples.md
paper_reading_framework.egg-info/PKG-INFO
paper_reading_framework.egg-info/SOURCES.txt
paper_reading_framework.egg-info/dependency_links.txt
paper_reading_framework.egg-info/entry_points.txt
paper_reading_framework.egg-info/requires.txt
paper_reading_framework.egg-info/top_level.txt
skills/paper_reading/README.md
skills/paper_reading/STRUCTURE.md
skills/paper_reading/skill.md
src/__init__.py
src/main.py
src/api/__init__.py
src/api/moonshot_client.py
src/implementation/__init__.py
src/implementation/code_generator.py
src/knowledge/__init__.py
src/knowledge/internalizer.py
src/paper/__init__.py
src/paper/fetcher.py
src/paper/parser.py
src/reading/__init__.py
src/reading/glossary_extractor.py
src/reading/guide_generator.py