dandelion.tools.clone_size

dandelion.tools.clone_size(self, max_size=None, clone_key=None, key_added=None)[source]

Quantifies size of clones

Parameters
  • self (Dandelion) – Dandelion object

  • max_size (int, optional) – The maximum size before value gets clipped. If None, the value will be returned as a numerical value.

  • clone_key (str, optional) – Column name specifying the clone_id column in metadata.

  • key_added (str, optional) – column name where clone size is tabulated into.

Returns

Return type

Dandelion object with clone size columns annotated in .metadata slot.