CHANGELOG.md
LICENSE
MANIFEST.in
README.md
pyproject.toml
scripts/bliss_hsa_loewe_reference_values.py
scripts/check_readme_examples.py
scripts/generate_seed_datasets.py
scripts/zip_reference_values.py
src/synfit/__init__.py
src/synfit/bliss.py
src/synfit/data.py
src/synfit/fitting.py
src/synfit/hill.py
src/synfit/joint_marginal.py
src/synfit/loewe.py
src/synfit/matrix.py
src/synfit/noise.py
src/synfit/param_roles.py
src/synfit/plotting.py
src/synfit/py.typed
src/synfit/single.py
src/synfit/synthetic.py
src/synfit/zip.py
src/synfit.egg-info/PKG-INFO
src/synfit.egg-info/SOURCES.txt
src/synfit.egg-info/dependency_links.txt
src/synfit.egg-info/requires.txt
src/synfit.egg-info/top_level.txt
src/synfit/scenarios/matrix_antagonism/config.json
src/synfit/scenarios/matrix_antagonism/rep1.csv
src/synfit/scenarios/matrix_antagonism/rep2.csv
src/synfit/scenarios/matrix_antagonism/rep3.csv
src/synfit/scenarios/matrix_asymmetric_potency/config.json
src/synfit/scenarios/matrix_asymmetric_potency/rep1.csv
src/synfit/scenarios/matrix_asymmetric_potency/rep2.csv
src/synfit/scenarios/matrix_asymmetric_potency/rep3.csv
src/synfit/scenarios/matrix_independent/config.json
src/synfit/scenarios/matrix_independent/rep1.csv
src/synfit/scenarios/matrix_independent/rep2.csv
src/synfit/scenarios/matrix_independent/rep3.csv
src/synfit/scenarios/matrix_large_grid/config.json
src/synfit/scenarios/matrix_large_grid/rep1.csv
src/synfit/scenarios/matrix_large_grid/rep2.csv
src/synfit/scenarios/matrix_large_grid/rep3.csv
src/synfit/scenarios/matrix_loewe_additive/config.json
src/synfit/scenarios/matrix_loewe_additive/rep1.csv
src/synfit/scenarios/matrix_loewe_additive/rep2.csv
src/synfit/scenarios/matrix_loewe_additive/rep3.csv
src/synfit/scenarios/matrix_loewe_sham/config.json
src/synfit/scenarios/matrix_loewe_sham/rep1.csv
src/synfit/scenarios/matrix_loewe_sham/rep2.csv
src/synfit/scenarios/matrix_loewe_sham/rep3.csv
src/synfit/scenarios/matrix_noisy/config.json
src/synfit/scenarios/matrix_noisy/rep1.csv
src/synfit/scenarios/matrix_noisy/rep2.csv
src/synfit/scenarios/matrix_noisy/rep3.csv
src/synfit/scenarios/matrix_rectangular/config.json
src/synfit/scenarios/matrix_rectangular/rep1.csv
src/synfit/scenarios/matrix_rectangular/rep2.csv
src/synfit/scenarios/matrix_rectangular/rep3.csv
src/synfit/scenarios/matrix_steep_hills/config.json
src/synfit/scenarios/matrix_steep_hills/rep1.csv
src/synfit/scenarios/matrix_steep_hills/rep2.csv
src/synfit/scenarios/matrix_steep_hills/rep3.csv
src/synfit/scenarios/matrix_strong_synergy/config.json
src/synfit/scenarios/matrix_strong_synergy/rep1.csv
src/synfit/scenarios/matrix_strong_synergy/rep2.csv
src/synfit/scenarios/matrix_strong_synergy/rep3.csv
src/synfit/scenarios/matrix_subtle_synergy/config.json
src/synfit/scenarios/matrix_subtle_synergy/rep1.csv
src/synfit/scenarios/matrix_subtle_synergy/rep2.csv
src/synfit/scenarios/matrix_subtle_synergy/rep3.csv
src/synfit/scenarios/matrix_synergy/config.json
src/synfit/scenarios/matrix_synergy/rep1.csv
src/synfit/scenarios/matrix_synergy/rep2.csv
src/synfit/scenarios/matrix_synergy/rep3.csv
src/synfit/scenarios/matrix_synergy_noisy/config.json
src/synfit/scenarios/matrix_synergy_noisy/rep1.csv
src/synfit/scenarios/matrix_synergy_noisy/rep2.csv
src/synfit/scenarios/matrix_synergy_noisy/rep3.csv
src/synfit/scenarios/matrix_two_replicates/config.json
src/synfit/scenarios/matrix_two_replicates/rep1.csv
src/synfit/scenarios/matrix_two_replicates/rep2.csv
src/synfit/scenarios/single_drug_activation/config.json
src/synfit/scenarios/single_drug_activation/single_drug_activation.csv
src/synfit/scenarios/single_drug_activation_calibration/config.json
src/synfit/scenarios/single_drug_activation_calibration/single_drug_activation_calibration.csv
src/synfit/scenarios/single_drug_clean/config.json
src/synfit/scenarios/single_drug_clean/single_drug_clean.csv
src/synfit/scenarios/single_drug_noisy/config.json
src/synfit/scenarios/single_drug_noisy/single_drug_noisy.csv
src/synfit/scenarios/single_drug_outliers/config.json
src/synfit/scenarios/single_drug_outliers/single_drug_outliers.csv
src/synfit/scenarios/single_drug_poisson_demo/config.json
src/synfit/scenarios/single_drug_poisson_demo/single_drug_poisson_demo.csv
tests/__init__.py
tests/helpers.py
tests/synergy_reference_conventions.py
tests/test_bliss.py
tests/test_compound_noise_fitters.py
tests/test_covariance_scaling.py
tests/test_default_bounds.py
tests/test_direction.py
tests/test_fit_config_copy.py
tests/test_fitting.py
tests/test_hill.py
tests/test_joint_marginal.py
tests/test_loewe.py
tests/test_matrix.py
tests/test_noise.py
tests/test_noise_compound.py
tests/test_noise_jacobian.py
tests/test_noise_spec.py
tests/test_param_roles.py
tests/test_plotting.py
tests/test_readme_examples.py
tests/test_scenarios.py
tests/test_synergy_additive_reference.py
tests/test_variance_anchor.py
tests/test_variance_models.py
tests/test_zip.py
tests/data/bliss_hsa_loewe_reference_values.json
tests/data/zip_reference_values.json