LICENSE
README.md
pyproject.toml
TexTOM.egg-info/PKG-INFO
TexTOM.egg-info/SOURCES.txt
TexTOM.egg-info/dependency_links.txt
TexTOM.egg-info/entry_points.txt
TexTOM.egg-info/requires.txt
TexTOM.egg-info/top_level.txt
textom/__init__.py
textom/config.py
textom/entries.py
textom/plugins.py
textom/textom.py
textom/version.py
textom/documentation/create_documentation.py
textom/documentation/introduction.tex
textom/documentation/textom_documentation.pdf
textom/documentation/textom_documentation.tex
textom/documentation/functions/absorption_correction.tex
textom/documentation/functions/adjust_data_scaling.tex
textom/documentation/functions/align_data.tex
textom/documentation/functions/calculate_order_parameters.tex
textom/documentation/functions/calculate_orientation_statistics.tex
textom/documentation/functions/calculate_segments.tex
textom/documentation/functions/check_alignment_consistency.tex
textom/documentation/functions/check_alignment_projection.tex
textom/documentation/functions/check_baselines.tex
textom/documentation/functions/check_fit_average.tex
textom/documentation/functions/check_fit_per_index.tex
textom/documentation/functions/check_fit_random.tex
textom/documentation/functions/check_geometry.tex
textom/documentation/functions/check_lossfunction.tex
textom/documentation/functions/check_orders.tex
textom/documentation/functions/check_powder_pattern.tex
textom/documentation/functions/check_projections_average.tex
textom/documentation/functions/check_projections_orientations.tex
textom/documentation/functions/check_projections_residuals.tex
textom/documentation/functions/check_residuals.tex
textom/documentation/functions/check_state.tex
textom/documentation/functions/export_paraview.tex
textom/documentation/functions/generate_sample.tex
textom/documentation/functions/help.tex
textom/documentation/functions/integrate.tex
textom/documentation/functions/integration_test.tex
textom/documentation/functions/link_xdmf.tex
textom/documentation/functions/list_opt.tex
textom/documentation/functions/list_projections.tex
textom/documentation/functions/list_results.tex
textom/documentation/functions/list_results_loaded.tex
textom/documentation/functions/list_sample_rotations.tex
textom/documentation/functions/load_opt.tex
textom/documentation/functions/load_results.tex
textom/documentation/functions/make_fit.tex
textom/documentation/functions/make_model.tex
textom/documentation/functions/mask_baseline_regions.tex
textom/documentation/functions/mask_detector_azimuthal.tex
textom/documentation/functions/mask_detector_pixels.tex
textom/documentation/functions/mask_peak_regions.tex
textom/documentation/functions/optimize.tex
textom/documentation/functions/optimize_auto.tex
textom/documentation/functions/preprocess_data.tex
textom/documentation/functions/reconstruct_1d_full.tex
textom/documentation/functions/save_images.tex
textom/documentation/functions/save_results.tex
textom/documentation/functions/set_path.tex
textom/documentation/functions/show_correlations.tex
textom/documentation/functions/show_histogram.tex
textom/documentation/functions/show_projection.tex
textom/documentation/functions/show_sample_outline.tex
textom/documentation/functions/show_slice_directions.tex
textom/documentation/functions/show_slice_ipf.tex
textom/documentation/functions/show_subvolume_average_odf.tex
textom/documentation/functions/show_subvolume_average_polefigure.tex
textom/documentation/functions/show_volume.tex
textom/documentation/functions/show_volume_ipf.tex
textom/documentation/functions/show_voxel_odf.tex
textom/documentation/functions/show_voxel_polefigure.tex
textom/documentation/functions/sort_integrated_files.tex
textom/documentation/functions/toggle_peak_fit.tex
textom/input/background_subtraction.py
textom/input/crystal.py
textom/input/generation.py
textom/input/geometry.py
textom/input/input_1Drec.py
textom/input/integration_parameters.py
textom/ressources/atomic_formfactors.txt
textom/ressources/symmetries.txt
textom/ressources/wise_phrases.txt
textom/ressources/symmetrizedHSH/output/1_n10
textom/ressources/symmetrizedHSH/output/1_n12
textom/ressources/symmetrizedHSH/output/1_n2
textom/ressources/symmetrizedHSH/output/1_n4
textom/ressources/symmetrizedHSH/output/1_n6
textom/ressources/symmetrizedHSH/output/1_n8
textom/ressources/symmetrizedHSH/output/222_n10
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textom/ressources/symmetrizedHSH/output/23_n12
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textom/ressources/symmetrizedHSH/output/23_n8
textom/ressources/symmetrizedHSH/output/2_n10
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textom/ressources/symmetrizedHSH/output/2_n2
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textom/ressources/symmetrizedHSH/output/2_n8
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textom/ressources/symmetrizedHSH/output/422_n8
textom/ressources/symmetrizedHSH/output/432_n12
textom/ressources/symmetrizedHSH/output/432_n8
textom/ressources/symmetrizedHSH/output/4_n10
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textom/ressources/symmetrizedHSH/output/4_n2
textom/ressources/symmetrizedHSH/output/4_n4
textom/ressources/symmetrizedHSH/output/4_n6
textom/ressources/symmetrizedHSH/output/4_n8
textom/ressources/symmetrizedHSH/output/622_n12
textom/ressources/symmetrizedHSH/output/622_n4
textom/ressources/symmetrizedHSH/output/622_n8
textom/ressources/symmetrizedHSH/output/6_n10
textom/ressources/symmetrizedHSH/output/6_n12
textom/ressources/symmetrizedHSH/output/6_n2
textom/ressources/symmetrizedHSH/output/6_n4
textom/ressources/symmetrizedHSH/output/6_n6
textom/ressources/symmetrizedHSH/output/6_n8
textom/ressources/symmetrizedHSH/output/overview.txt
textom/scripts/absorption_corrector.py
textom/scripts/absorption_corrector_try1.py
textom/scripts/absorption_corrector_try2.py
textom/scripts/alignment_id13.py
textom/scripts/analyse_gridbased.py
textom/scripts/analyse_gridbased_2.py
textom/scripts/aquisition_id13.py
textom/scripts/check_difflet_rotation.py
textom/scripts/check_geo.py
textom/scripts/check_hsh_against_gridbased.py
textom/scripts/check_rotation_quaternions.py
textom/scripts/conewedge.py
textom/scripts/create.py
textom/scripts/dose_calculation.py
textom/scripts/generate_rotations.py
textom/scripts/generate_rotations_wedge.py
textom/scripts/generate_sample.py
textom/scripts/geometry_plot_draft.py
textom/scripts/get_fischer_std.py
textom/scripts/get_reflection_conditions.py
textom/scripts/integration_testing.py
textom/scripts/model_difflets_odftt.py
textom/scripts/modelling_cajetan.py
textom/scripts/parallel_integration.py
textom/scripts/plot_MDL.py
textom/scripts/plot_fundamental_zones.py
textom/scripts/plt_angles.py
textom/scripts/recompress_h5.py
textom/scripts/redirect_axes_for_PV.py
textom/scripts/show_fourierexpansion.py
textom/scripts/step1_simulate_gaussian.py
textom/scripts/step2_simulate_textom_data.py
textom/scripts/step3_fit_simdata.py
textom/scripts/test_sampling.py
textom/scripts/test_so3_sampling.py
textom/scripts/text_cctbx.py
textom/scripts/textured_diff_pattern.py
textom/scripts/write_angles_to_datafiles.py
textom/scripts/write_full_texture.py
textom/src/__init__.py
textom/src/creator.py
textom/src/exceptions.py
textom/src/handle.py
textom/src/mask.py
textom/src/misc.py
textom/src/numba_plugins.py
textom/src/plotting.py
textom/src/analysis/__init__.py
textom/src/analysis/orderparameters.py
textom/src/analysis/orix_plugins.py
textom/src/analysis/segmentation.py
textom/src/data_treatment/__init__.py
textom/src/data_treatment/baselines.py
textom/src/data_treatment/data.py
textom/src/data_treatment/mumott_plugins.py
textom/src/data_treatment/mumott_functions/core/__init__.py
textom/src/data_treatment/mumott_functions/core/cuda_kernels.py
textom/src/data_treatment/mumott_functions/core/cuda_utils.py
textom/src/data_treatment/mumott_functions/core/deprecation_warning.py
textom/src/data_treatment/mumott_functions/core/geometry.py
textom/src/data_treatment/mumott_functions/core/hashing.py
textom/src/data_treatment/mumott_functions/core/john_transform.py
textom/src/data_treatment/mumott_functions/core/john_transform_cuda.py
textom/src/data_treatment/mumott_functions/core/john_transform_sparse_cuda.py
textom/src/data_treatment/mumott_functions/core/numba_setup.py
textom/src/data_treatment/mumott_functions/core/probed_coordinates.py
textom/src/data_treatment/mumott_functions/core/projection_stack.py
textom/src/data_treatment/mumott_functions/core/simulator.py
textom/src/data_treatment/mumott_functions/core/spherical_harmonic_mapper.py
textom/src/data_treatment/mumott_functions/core/wigner_d_utilities.py
textom/src/data_treatment/mumott_functions/data_handling/__init__.py
textom/src/data_treatment/mumott_functions/data_handling/data_container.py
textom/src/data_treatment/mumott_functions/data_handling/utilities/__init__.py
textom/src/data_treatment/mumott_functions/data_handling/utilities/data_processing.py
textom/src/data_treatment/mumott_functions/methods/__init__.py
textom/src/data_treatment/mumott_functions/methods/basis_sets/__init__.py
textom/src/data_treatment/mumott_functions/methods/basis_sets/base_basis_set.py
textom/src/data_treatment/mumott_functions/methods/basis_sets/gaussian_kernels.py
textom/src/data_treatment/mumott_functions/methods/basis_sets/nearest_neighbor.py
textom/src/data_treatment/mumott_functions/methods/basis_sets/spherical_harmonics.py
textom/src/data_treatment/mumott_functions/methods/basis_sets/trivial_basis.py
textom/src/data_treatment/mumott_functions/methods/projectors/__init__.py
textom/src/data_treatment/mumott_functions/methods/projectors/base_projector.py
textom/src/data_treatment/mumott_functions/methods/projectors/saxs_projector.py
textom/src/data_treatment/mumott_functions/methods/projectors/saxs_projector_cuda.py
textom/src/data_treatment/mumott_functions/methods/residual_calculators/__init__.py
textom/src/data_treatment/mumott_functions/methods/residual_calculators/base_residual_calculator.py
textom/src/data_treatment/mumott_functions/methods/residual_calculators/gradient_residual_calculator.py
textom/src/data_treatment/mumott_functions/methods/residual_calculators/zonal_harmonic_gradient_calculator.py
textom/src/data_treatment/mumott_functions/methods/utilities/__init__.py
textom/src/data_treatment/mumott_functions/methods/utilities/fiber_fit.py
textom/src/data_treatment/mumott_functions/methods/utilities/grids_on_the_sphere.py
textom/src/data_treatment/mumott_functions/methods/utilities/preconditioning.py
textom/src/data_treatment/mumott_functions/methods/utilities/tensor_operations.py
textom/src/data_treatment/mumott_functions/optimization/__init__.py
textom/src/data_treatment/mumott_functions/optimization/loss_functions/__init__.py
textom/src/data_treatment/mumott_functions/optimization/loss_functions/base_loss_function.py
textom/src/data_treatment/mumott_functions/optimization/loss_functions/huber_loss.py
textom/src/data_treatment/mumott_functions/optimization/loss_functions/squared_loss.py
textom/src/data_treatment/mumott_functions/optimization/optimizers/__init__.py
textom/src/data_treatment/mumott_functions/optimization/optimizers/base_optimizer.py
textom/src/data_treatment/mumott_functions/optimization/optimizers/gradient_descent.py
textom/src/data_treatment/mumott_functions/optimization/optimizers/lbfgs.py
textom/src/data_treatment/mumott_functions/optimization/optimizers/zonal_harmonics_optimizer.py
textom/src/data_treatment/mumott_functions/optimization/regularizers/__init__.py
textom/src/data_treatment/mumott_functions/optimization/regularizers/base_regularizer.py
textom/src/data_treatment/mumott_functions/optimization/regularizers/group_lasso.py
textom/src/data_treatment/mumott_functions/optimization/regularizers/huber_norm.py
textom/src/data_treatment/mumott_functions/optimization/regularizers/l1_norm.py
textom/src/data_treatment/mumott_functions/optimization/regularizers/l2_norm.py
textom/src/data_treatment/mumott_functions/optimization/regularizers/laplacian.py
textom/src/data_treatment/mumott_functions/optimization/regularizers/total_variation.py
textom/src/data_treatment/mumott_functions/pipelines/__init__.py
textom/src/data_treatment/mumott_functions/pipelines/optical_flow_alignment.py
textom/src/data_treatment/mumott_functions/pipelines/phase_matching_alignment.py
textom/src/data_treatment/mumott_functions/pipelines/reconstruction/__init__.py
textom/src/data_treatment/mumott_functions/pipelines/reconstruction/discrete_directions.py
textom/src/data_treatment/mumott_functions/pipelines/reconstruction/group_lasso.py
textom/src/data_treatment/mumott_functions/pipelines/reconstruction/mitra.py
textom/src/data_treatment/mumott_functions/pipelines/reconstruction/sigtt.py
textom/src/data_treatment/mumott_functions/pipelines/reconstruction/sirt.py
textom/src/data_treatment/mumott_functions/pipelines/utilities/__init__.py
textom/src/data_treatment/mumott_functions/pipelines/utilities/alignment_geometry.py
textom/src/data_treatment/mumott_functions/pipelines/utilities/image_processing.py
textom/src/integration/__init__.py
textom/src/integration/integration_launcher.py
textom/src/integration/pyfai_plugins.py
textom/src/model/__init__.py
textom/src/model/absorption_correction.py
textom/src/model/model_crystal.py
textom/src/model/model_projection.py
textom/src/model/model_textom.py
textom/src/model/rotation.py
textom/src/model/symmetries.py
textom/src/odf/__init__.py
textom/src/odf/fibre.py
textom/src/odf/gridbased.py
textom/src/odf/hsh.py
textom/src/odf/hsh_symmetrization.py
textom/src/optimization/__init__.py
textom/src/optimization/fitting.py
textom/src/optimization/multifit.py
textom/src/optimization/optimizer.py
textom/tests/test_simple.py
textom/tests/integration/test_pyfai_plugins.py
textom/tests/optimization/test_fitting.py