viralqc/__init__.py,sha256=5hHaJi-i_86M8CDbAtd0F8COatoeU3raylYjj72d6a4,364
viralqc/cli.py,sha256=LQMGwL79E-kYtPkAdHdOGbdVOrXuq_RjFiAYXlX210w,8463
viralqc/commands/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
viralqc/commands/prepare_ncbi_submission/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
viralqc/commands/prepare_ncbi_submission/sample.py,sha256=-xdabwBIKU2-YTj6xo1yegEvZCWiNu5ApL481HO-6YU,4754
viralqc/commands/prepare_ncbi_submission/virus.py,sha256=O4hYtc6-xGhS1CPRCTEcwzWr2brgzIbC_amgfzoYm8c,6771
viralqc/config/datasets.yml,sha256=M3-fA0R6jAE3qN3T3Lv5_AVoeLBTO-Bpd0ZoYlb8CS8,29701
viralqc/core/__init__.py,sha256=XaQdx6YxjGe3589OETh19hqKvpGuJwCzl0-NUHnXO54,95
viralqc/core/datasets.py,sha256=n2ASukU8nV7GzfWtG9UNZId-Iax-JV5_gh461pOU2og,1370
viralqc/core/defaults.py,sha256=JpFjoayUayn74xYf0Yo6M2SxxkRWOhi00cBvJMyyXJ4,632
viralqc/core/errors.py,sha256=bL1iYJ_ryD0dRrl8v7icI6Hec1H7W2FJDGYesKnEaUw,454
viralqc/core/models.py,sha256=Z0U1CEHjpX2Ck8_oQskmiQSyeTJ4J6zmzVmbTtpmltA,2033
viralqc/core/ncbi_submission.py,sha256=c9M66VZEOhWFd4k8mBs72v7k3RGo7ntJcHfq98VJ4Kk,22413
viralqc/core/prepare_submission.py,sha256=iQbvo9gXtvXWIiOV1H_1aVk1I4M2Avlkbvp_iyeD8as,30011
viralqc/core/run_analysis.py,sha256=hVF60C47BkGieEmgzgoCToBBUYzQBLrJS8kxpUQ2jWg,3027
viralqc/core/utils.py,sha256=yRixHq1_zZpI0YPbzD3Uvb9x8UahiaQ5Kf6G5boKzv0,4310
viralqc/scripts/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
viralqc/scripts/get_blast_database.smk,sha256=ttvSco99jq5NYRgzbJNZ-63X-SopKg0dOmE5XN5roCs,4730
viralqc/scripts/get_public_datasets.smk,sha256=IGetXPss7W6ImtbEyO8vEwcJ-uK5U4MZO-Cu6fI8iOY,6240
viralqc/scripts/run_analysis.smk,sha256=AcyIjy8W2x_riBrTj0p-6uD1ijy0X9n6HSUEDM1RtEM,22312
viralqc/scripts/python/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
viralqc/scripts/python/extract_target_regions.py,sha256=tvoOaJJkUXK2NCTN4TkUNBF_3OMuL_5bny3VOZdNq1Y,13432
viralqc/scripts/python/format_nextclade_sort.py,sha256=JT8-WaRRzeVnkrYLIPpxSB9wp89sugt_V_zlexAsaec,5293
viralqc/scripts/python/get_github_dataset.py,sha256=KdiABjteZpEH5SNxlvDNHYsogTuSehavjJQEzki43mA,2254
viralqc/scripts/python/get_minimizer_index.py,sha256=q3KMWpP3oT3gyCPBQjarDYpFvT_C1pfG2Q5LtY-dbxU,5139
viralqc/scripts/python/itemize_sequences.py,sha256=dT7hUW9z30beVatZWzCYXqSyuRWn4AecaBH1MGktCI0,1521
viralqc/scripts/python/jsonl_to_gff.py,sha256=9c4ZvojzyotCFEieiVw0tylKwwHNogLxNHzmHi3CelY,10268
viralqc/scripts/python/normalize_nextclade_dataset_dir.py,sha256=aZVOtPqkJlFv34q0tXhSDZXCkQGvhB6ZxBlTXuURjSo,2253
viralqc/scripts/python/post_process_nextclade.py,sha256=mSOMJWHx8YfEYhWCXh_9biAwIinruogFV6DgUY9dzp8,46426
viralqc/scripts/python/reorder_cds.py,sha256=P9auiFkiQQ6A_PZuCsimGC6ecWpyQBu6uQbdAQW_Axk,3898
viralqc/scripts/python/split_gff_by_sample.py,sha256=xBZGsJYfuK8_0rCxcJrHJ7p_j62irygNK20h8KZzHAU,6608
viralqc/scripts/python/split_tbl_by_sample.py,sha256=QwbM2CUhwHBr4zWZ6juPhhyybB17G54lfiKXfG5c1fQ,4887
viralqc/scripts/python/validate_fasta.py,sha256=EbXDDGOkQA4_4lCE3wNz-hmM2HtUmxZhp0vge6qXGgU,2343
viralqc-1.1.1.dist-info/METADATA,sha256=4oZ72Fqxl3DtqmCWu_7xqTcm_osRGnBKnzZy179rq5Q,11753
viralqc-1.1.1.dist-info/WHEEL,sha256=lCkmxWfQsSc9CfIClYeavTdQeEX2toPqufh9gI35EQA,87
viralqc-1.1.1.dist-info/entry_points.txt,sha256=Q980QalY7DgZRQoHykLtE4qDVCRNoM8tWsBQlpnHunw,40
viralqc-1.1.1.dist-info/licenses/LICENSE,sha256=le9hfFkTRtcl0oCU02tkwfP7x_kI3fYlSQM8zn7qQvw,1091
viralqc-1.1.1.dist-info/RECORD,,
