LICENSE
README.md
pyproject.toml
straindesign/__init__.py
straindesign/compression.py
straindesign/compute_strain_designs.py
straindesign/cplex_interface.py
straindesign/glpk_interface.py
straindesign/gurobi_interface.py
straindesign/indicatorConstraints.py
straindesign/lptools.py
straindesign/names.py
straindesign/networktools.py
straindesign/parse_constr.py
straindesign/pool.py
straindesign/scip_interface.py
straindesign/solver_interface.py
straindesign/speedy_fva.py
straindesign/strainDesignMILP.py
straindesign/strainDesignModule.py
straindesign/strainDesignProblem.py
straindesign/strainDesignSolutions.py
straindesign.egg-info/PKG-INFO
straindesign.egg-info/SOURCES.txt
straindesign.egg-info/dependency_links.txt
straindesign.egg-info/requires.txt
straindesign.egg-info/top_level.txt
tests/test_01_load_models_and_solvers.py
tests/test_02_lp_optimization.py
tests/test_03_plots.py
tests/test_04_preprocessing.py
tests/test_05_straindesign.py
tests/test_06_multiprocessing.py
tests/test_07_compression.py
tests/test_08_gene_ko.py
tests/test_09_performance.py
tests/test_10_gene_design_validity.py
tests/test_11_gene_regulatory_compression.py
tests/test_12_save_load_embed_model.py
tests/test_13_public_api.py