Metadata-Version: 2.3
Name: flexsweep
Version: 1.2.5
Summary: 
License: MIT
Author: Jesus Murga-Moreno
Author-email: murgamoreno@gmail.com
Requires-Python: >=3.12
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.12
Classifier: Programming Language :: Python :: 3.13
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Project-URL: Homepage, https://github.com/jmurga/flexsweep
Project-URL: Repository, https://github.com/jmurga/flexsweep
Description-Content-Type: text/markdown

[![Documentation Status](https://readthedocs.org/projects/flexsweep/badge/?version=latest)](https://flexsweep.readthedocs.io/en/latest/?badge=latest)

# Flexsweep v2.0

(In development, not recommended for end users).

The second version of [Flexsweep software](https://doi.org/10.1093/molbev/msad139), a versatile tool for detecting selective sweeps. The software trains a convolutional neural network (CNN) to classify genomic loci as sweep or neutral regions. The workflow begins with simulating data under an appropriate demographic model and classify regions as neutral or sweeps, including several selection events regarding sweep strength, age, starting allele frequency (softness), and ending allele frequency (completeness).

Please see [documentation](https://flexsweep.readthedocs.io/en/latest/) for further details.


