LICENSE
README.md
pyproject.toml
src/scilintr/__init__.py
src/scilintr/__main__.py
src/scilintr/_engine.py
src/scilintr/_finding.py
src/scilintr/_waivers.py
src/scilintr/cli.py
src/scilintr.egg-info/PKG-INFO
src/scilintr.egg-info/SOURCES.txt
src/scilintr.egg-info/dependency_links.txt
src/scilintr.egg-info/entry_points.txt
src/scilintr.egg-info/requires.txt
src/scilintr.egg-info/top_level.txt
src/scilintr/_rules/__init__.py
src/scilintr/_rules/_base.py
src/scilintr/_rules/_degraded_default.py
src/scilintr/_rules/ambiguous_layer_access.py
src/scilintr/_rules/broad_exception.py
src/scilintr/_rules/duplicate_parameter_source.py
src/scilintr/_rules/duplicate_parameter_source_cross_file.py
src/scilintr/_rules/hardcoded_design_formula.py
src/scilintr/_rules/hardcoded_sample_ids.py
src/scilintr/_rules/implicit_file_selection.py
src/scilintr/_rules/label_in_blind_stage.py
src/scilintr/_rules/magic_threshold.py
src/scilintr/_rules/plot_side_effect_filter.py
src/scilintr/_rules/positional_metadata_access.py
src/scilintr/_rules/positional_sample_alignment.py
src/scilintr/_rules/return_none_on_missing_input.py
src/scilintr/_rules/runtime_assert.py
src/scilintr/_rules/sentinel_mask_assignment.py
src/scilintr/_rules/silent_default_rebind.py
src/scilintr/_rules/silent_fallback_return.py
src/scilintr/_rules/silent_pass.py
src/scilintr/_rules/silent_stub_fallback.py
src/scilintr/_rules/synthetic_data_generation.py
src/scilintr/_rules/unannotated_filter.py
src/scilintr/_rules/unannotated_missingness.py
src/scilintr/_rules/unannotated_transform.py
src/scilintr/_rules/unchecked_cache.py
src/scilintr/_rules/unchecked_merge.py
src/scilintr/_rules/unchecked_model_fit.py
src/scilintr/_rules/unconsumed_cli_flag.py
src/scilintr/_rules/unseeded_stochastic.py
src/scilintr/_rules/unvalidated_config.py
src/scilintr/_rules/warning_suppression.py
tests/test_ambiguous_layer_access.py
tests/test_broad_exception.py
tests/test_duplicate_parameter_source.py
tests/test_engine.py
tests/test_hardcoded_design_formula.py
tests/test_hardcoded_sample_ids.py
tests/test_implicit_file_selection.py
tests/test_label_in_blind_stage.py
tests/test_magic_threshold.py
tests/test_plot_side_effect_filter.py
tests/test_positional_metadata_access.py
tests/test_positional_sample_alignment.py
tests/test_runtime_assert.py
tests/test_sentinel_mask_assignment.py
tests/test_silent_default_rebind.py
tests/test_silent_fallback_return.py
tests/test_silent_stub_fallback.py
tests/test_synthetic_data_generation.py
tests/test_unannotated_filter.py
tests/test_unannotated_missingness.py
tests/test_unannotated_transform.py
tests/test_unchecked_cache.py
tests/test_unchecked_merge.py
tests/test_unchecked_model_fit.py
tests/test_unconsumed_cli_flag.py
tests/test_unseeded_stochastic.py
tests/test_unvalidated_config.py
tests/test_waivers.py
tests/test_warning_suppression.py