CHANGELOG.md
LICENSE.md
MANIFEST.in
PROJECT_REVIEW.md
README.md
pyproject.toml
riana/__init__.py
riana/__main__.py
riana/cli.py
riana/config.py
riana/constants.py
riana/exceptions.py
riana/logger.py
riana/params.py
riana/progress.py
riana/records.py
riana/utils.py
riana.egg-info/PKG-INFO
riana.egg-info/SOURCES.txt
riana.egg-info/dependency_links.txt
riana.egg-info/entry_points.txt
riana.egg-info/requires.txt
riana.egg-info/top_level.txt
riana/algorithms/__init__.py
riana/algorithms/baseline.py
riana/algorithms/calibration.py
riana/algorithms/isotope_dist.py
riana/algorithms/mass_calc.py
riana/algorithms/peaks.py
riana/algorithms/smoothing.py
riana/core/__init__.py
riana/core/fitting.py
riana/core/fsynthesis.py
riana/core/integration.py
riana/core/linear_model.py
riana/core/mbr.py
riana/core/models.py
riana/core/pipeline.py
riana/core/protein.py
riana/data/__init__.py
riana/data/coefficients/__init__.py
riana/data/coefficients/alamillo_2025_ac16.csv
riana/data/coefficients/alamillo_2025_cm.csv
riana/data/coefficients/alamillo_2025_ipsc.csv
riana/data/coefficients/commerford_1983.csv
riana/data/coefficients/deberneh_2025_rss.csv
riana/data/coefficients/ilchenko_2019.csv
riana/data/coefficients/juber_2026_o18_ac16.csv
riana/data/coefficients/rachdaoui_2009_o18.csv
riana/gui/__init__.py
riana/gui/app.py
riana/gui/chromatogram.py
riana/gui/curve_view.py
riana/gui/export.py
riana/gui/integrate_tab.py
riana/gui/main_window.py
riana/gui/model_tab.py
riana/gui/models.py
riana/gui/plotting.py
riana/gui/progress.py
riana/gui/protein_tab.py
riana/gui/tasks.py
riana/gui/resources/__init__.py
riana/gui/resources/riana.png
riana/io/__init__.py
riana/io/diann.py
riana/io/manifest.py
riana/io/mzml.py
riana/io/mztab.py
riana/io/percolator.py
riana/io/sdrf.py
riana/io/writers.py
tests/__init__.py
tests/test_accmass.py
tests/test_algorithms.py
tests/test_cli.py
tests/test_diann.py
tests/test_fitting.py
tests/test_gui.py
tests/test_integration_port.py
tests/test_io.py
tests/test_linear_model.py
tests/test_m7_mods.py
tests/test_manifest.py
tests/test_mbr.py
tests/test_o18.py
tests/test_pipeline.py
tests/test_progress.py
tests/test_protein.py
tests/test_sdrf.py