.gitignore
CHANGELOG.md
CLAUDE.md
LICENSE
MANIFEST.in
README.md
build_jars.bat
build_jars.sh
gradle_install.sh
pylintrc
pyproject.toml
readthedocs.yml
setup.cfg
setup.py
test_pytest.sh
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envs/environment_3_10.yml
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envs/environment_3_12.yml
envs/environment_3_13.yml
envs/environment_dev_3_10.yml
envs/environment_dev_3_11.yml
envs/environment_dev_3_12.yml
envs/environment_dev_3_13.yml
examples/README.rst
examples/environment.yml
examples/elmodels/README.rst
examples/elmodels/plot_1_elembeddings.py
examples/elmodels/plot_2_elboxembeddings.py
examples/graph_based/README.rst
examples/graph_based/plot_1_dl2vec.py
examples/syntactic/README.rst
examples/syntactic/plot_1_onto2vec.py
examples/syntactic/plot_2_opa2vec.py
experiments/README.md
experiments/compute_deductive_closure.py
experiments/create_subsumption_dataset.py
experiments/datasets.py
experiments/download_ontologies.py
experiments/environment.yml
experiments/evaluators.py
experiments/utils.py
experiments/box2el/ppi.py
experiments/box2el/subsumption.py
experiments/boxel/ppi.py
experiments/boxel/subsumption.py
experiments/cate/add_ppi_nodes.py
experiments/cate/data.py
experiments/cate/kg.py
experiments/cate/ppi.py
experiments/cate/subsumption.py
experiments/elbe/ppi.py
experiments/elembeddings/ppi.py
experiments/elembeddings/subsumption.py
experiments/opa2vec/ppi.py
experiments/opa2vec/ppi_nn.py
experiments/opa2vec/subsumption.py
experiments/opa2vec/subsumption_nn.py
experiments/owl2vecstar/ppi.py
experiments/owl2vecstar/ppi_kg.py
experiments/owl2vecstar/subsumption.py
experiments/owl2vecstar/subsumption_kg.py
extra/annotations.py
extra/create_dataset.py
extra/uni2pandas.py
extra/utils.py
gateway/build.gradle
gateway/gradlew
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gateway/src/main/groovy/org/mowl/HelloG.groovy
gateway/src/main/java/Main.java
gateway/src/main/java/org/mowl/Edge.java
gateway/src/main/java/org/mowl/MOWLShortFormProvider.java
gateway/src/main/scala/org/mowl/Hello.scala
gateway/src/main/scala/org/mowl/Types.scala
gateway/src/main/scala/org/mowl/Utils.scala
gateway/src/main/scala/org/mowl/CatParser/CatParser.scala
gateway/src/main/scala/org/mowl/Projectors/AbstractProjector.scala
gateway/src/main/scala/org/mowl/Projectors/DL2VecProjector.scala
gateway/src/main/scala/org/mowl/Projectors/OWL2VecStarProjector.scala
gateway/src/main/scala/org/mowl/Projectors/TaxonomyProjector.scala
gateway/src/main/scala/org/mowl/Projectors/TaxonomyWithRelsProjector.scala
gateway/src/main/scala/org/mowl/Walking/DeepWalk.scala
gateway/src/main/scala/org/mowl/Walking/Node2Vec.scala
mowl/__init__.py
mowl/main.py
mowl/base_models/__init__.py
mowl/base_models/alcmodel.py
mowl/base_models/elmodel.py
mowl/base_models/graph_model.py
mowl/base_models/model.py
mowl/base_models/syntactic_model.py
mowl/corpus/__init__.py
mowl/corpus/base.py
mowl/datasets/__init__.py
mowl/datasets/base.py
mowl/datasets/gci.py
mowl/datasets/alc/__init__.py
mowl/datasets/alc/alc_dataset.py
mowl/datasets/builtin/#family.py#
mowl/datasets/builtin/#gda.py#
mowl/datasets/builtin/__init__.py
mowl/datasets/builtin/family.py
mowl/datasets/builtin/gda.py
mowl/datasets/builtin/gda2.py
mowl/datasets/builtin/hpi.py
mowl/datasets/builtin/ppi_yeast.py
mowl/datasets/builtin/subsumption.py
mowl/datasets/el/__init__.py
mowl/datasets/el/el_dataset.py
mowl/error/__init__.py
mowl/error/messages.py
mowl/evaluation/__init__.py
mowl/evaluation/base.py
mowl/evaluation/gda.py
mowl/evaluation/metrics.py
mowl/evaluation/ppi.py
mowl/evaluation/predictions.py
mowl/evaluation/rank_based.py
mowl/evaluation/subsumption.py
mowl/inference/__init__.py
mowl/inference/axiom_scoring.py
mowl/inference/base.py
mowl/inference/cosine.py
mowl/inference/el.py
mowl/inference/elinfer/gci0.py
mowl/inference/elinfer/gci2.py
mowl/kge/__init__.py
mowl/kge/model.py
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mowl/models/__init__.py
mowl/models/boxsquaredel/__init__.py
mowl/models/boxsquaredel/evaluate.py
mowl/models/boxsquaredel/model.py
mowl/models/boxsquaredel/examples/__init__.py
mowl/models/boxsquaredel/examples/model_gda.py
mowl/models/boxsquaredel/examples/model_ppi.py
mowl/models/elbe/__init__.py
mowl/models/elbe/evaluate.py
mowl/models/elbe/model.py
mowl/models/elbe/examples/__init__.py
mowl/models/elbe/examples/model_gda.py
mowl/models/elbe/examples/model_ppi.py
mowl/models/elembeddings/#evaluate.py#
mowl/models/elembeddings/__init__.py
mowl/models/elembeddings/evaluate.py
mowl/models/elembeddings/model.py
mowl/models/elembeddings/examples/__init__.py
mowl/models/elembeddings/examples/model_gda.py
mowl/models/elembeddings/examples/model_ppi.py
mowl/models/falcon/__init__.py
mowl/models/falcon/evaluate.py
mowl/models/falcon/module.py
mowl/models/falcon/examples/__init__.py
mowl/models/falcon/examples/model_gda.py
mowl/models/falcon/examples/model_ppi.py
mowl/models/graph_kge/__init__.py
mowl/models/graph_kge/graph_pykeen_model.py
mowl/models/graph_random_walk/__init__.py
mowl/models/graph_random_walk/random_walk_w2v_model.py
mowl/models/syntactic/__init__.py
mowl/models/syntactic/w2v_model.py
mowl/nn/__init__.py
mowl/nn/el/__init__.py
mowl/nn/el/elmodule.py
mowl/nn/el/boxel/__init__.py
mowl/nn/el/boxel/losses.py
mowl/nn/el/boxel/module.py
mowl/nn/el/boxsquaredel/__init__.py
mowl/nn/el/boxsquaredel/losses.py
mowl/nn/el/boxsquaredel/module.py
mowl/nn/el/elbe/__init__.py
mowl/nn/el/elbe/losses.py
mowl/nn/el/elbe/module.py
mowl/nn/el/elem/__init__.py
mowl/nn/el/elem/losses.py
mowl/nn/el/elem/module.py
mowl/ontology/__init__.py
mowl/ontology/create.py
mowl/ontology/extend.py
mowl/ontology/normalize.py
mowl/owlapi/__init__.py
mowl/owlapi/adapter.py
mowl/owlapi/constants.py
mowl/owlapi/defaults.py
mowl/owlapi/model.py
mowl/projection/__init__.py
mowl/projection/base.py
mowl/projection/edge.py
mowl/projection/factory.py
mowl/projection/util.py
mowl/projection/categorical/__init__.py
mowl/projection/categorical/edge.py
mowl/projection/categorical/model.py
mowl/projection/categorical/utils.py
mowl/projection/dl2vec/README.md
mowl/projection/dl2vec/__init__.py
mowl/projection/dl2vec/model.py
mowl/projection/dl2vec/tree.py
mowl/projection/owl2vec_star/__init__.py
mowl/projection/owl2vec_star/model.py
mowl/projection/taxonomy/__init__.py
mowl/projection/taxonomy/model.py
mowl/projection/taxonomy_rels/__init__.py
mowl/projection/taxonomy_rels/model.py
mowl/reasoning/__init__.py
mowl/reasoning/base.py
mowl/utils/__init__.py
mowl/utils/data.py
mowl/utils/random.py
mowl/visualization/__init__.py
mowl/visualization/base.py
mowl/walking/__init__.py
mowl/walking/factory.py
mowl/walking/walking.py
mowl/walking/deepwalk/__init__.py
mowl/walking/deepwalk/model.py
mowl/walking/node2vec/__init__.py
mowl/walking/node2vec/model.py
mowl_borg.egg-info/PKG-INFO
mowl_borg.egg-info/SOURCES.txt
mowl_borg.egg-info/dependency_links.txt
mowl_borg.egg-info/requires.txt
mowl_borg.egg-info/top_level.txt
tests/__init__.py
tests/conftest.py
tests/datasetFactory.py
tests/base_models/__init__.py
tests/base_models/test_elmodel.py
tests/base_models/test_graph_kge_model.py
tests/base_models/test_graph_model.py
tests/base_models/test_graph_random_walks_model.py
tests/base_models/test_model.py
tests/base_models/test_syntactic_model.py
tests/corpus/__init__.py
tests/corpus/test_base.py
tests/datasets/__init__.py
tests/datasets/test_alc_dataset.py
tests/datasets/test_dataset_base.py
tests/datasets/test_dataset_builtin.py
tests/datasets/test_el_dataset.py
tests/datasets/test_reindex_dataset.py
tests/error/__init__.py
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tests/evaluation/test_base.py
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tests/evaluation/test_gda.py
tests/evaluation/test_kg_kge.py
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tests/inductive/__init__.py
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tests/inductive/test_graph_rw_model.py
tests/inductive/test_semantic_model.py
tests/inductive/test_syntactic_w2v_model.py
tests/kge/__init__.py
tests/kge/test_kge.py
tests/models/__init__.py
tests/models/test_el_models.py
tests/models/test_graph_pykeen_model.py
tests/models/test_graph_rw_w2v_model.py
tests/nn/__init__.py
tests/nn/test_boxsquaredel_module.py
tests/nn/test_elbe_module.py
tests/nn/test_elem_module.py
tests/nn/fixtures/__init__.py
tests/nn/fixtures/elaxioms.py
tests/ontology/__init__.py
tests/ontology/test_create.py
tests/ontology/test_extend.py
tests/ontology/test_normalize.py
tests/ontology/fixtures/1_columns.tsv
tests/ontology/fixtures/2_columns.tsv
tests/ontology/fixtures/3_columns.tsv
tests/ontology/fixtures/4_columns.tsv
tests/ontology/fixtures/family.tsv
tests/ontology/fixtures/family2.tsv
tests/owlapi/__init__.py
tests/owlapi/test_adapter.py
tests/owlapi/test_objects.py
tests/projection/__init__.py
tests/projection/test_base.py
tests/projection/test_cate.py
tests/projection/test_dl2vec.py
tests/projection/test_edge.py
tests/projection/test_factory.py
tests/projection/test_owl2vec.py
tests/projection/test_taxonomy.py
tests/projection/test_taxonomy_rels.py
tests/projection/fixtures/cate_family.csv
tests/reasoning/__init__.py
tests/reasoning/test_base.py
tests/utils/test_data.py
tests/walking/__init__.py
tests/walking/test_base.py
tests/walking/test_deepwalk.py
tests/walking/test_factory.py
tests/walking/test_node2vec.py