pacbio\_data\_processing package
================================

Subpackages
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.. toctree::
   :maxdepth: 4

   pacbio_data_processing.ui

Submodules
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pacbio\_data\_processing.bam module
-----------------------------------

.. automodule:: pacbio_data_processing.bam
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pacbio\_data\_processing.bam\_file\_filter module
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.. automodule:: pacbio_data_processing.bam_file_filter
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pacbio\_data\_processing.bam\_utils module
------------------------------------------

.. automodule:: pacbio_data_processing.bam_utils
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pacbio\_data\_processing.cigar module
-------------------------------------

.. automodule:: pacbio_data_processing.cigar
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pacbio\_data\_processing.constants module
-----------------------------------------

.. automodule:: pacbio_data_processing.constants
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pacbio\_data\_processing.errors module
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.. automodule:: pacbio_data_processing.errors
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pacbio\_data\_processing.external module
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.. automodule:: pacbio_data_processing.external
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pacbio\_data\_processing.filters module
---------------------------------------

.. automodule:: pacbio_data_processing.filters
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pacbio\_data\_processing.ipd module
-----------------------------------

.. automodule:: pacbio_data_processing.ipd
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pacbio\_data\_processing.logs module
------------------------------------

.. automodule:: pacbio_data_processing.logs
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pacbio\_data\_processing.methylation module
-------------------------------------------

.. automodule:: pacbio_data_processing.methylation
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pacbio\_data\_processing.parameters module
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.. automodule:: pacbio_data_processing.parameters
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pacbio\_data\_processing.plots module
-------------------------------------

.. automodule:: pacbio_data_processing.plots
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pacbio\_data\_processing.sam module
-----------------------------------

.. automodule:: pacbio_data_processing.sam
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pacbio\_data\_processing.sentinel module
----------------------------------------

.. automodule:: pacbio_data_processing.sentinel
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pacbio\_data\_processing.sm\_analysis module
--------------------------------------------

.. automodule:: pacbio_data_processing.sm_analysis
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pacbio\_data\_processing.sm\_analysis\_gui module
-------------------------------------------------

.. automodule:: pacbio_data_processing.sm_analysis_gui
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pacbio\_data\_processing.summary module
---------------------------------------

.. automodule:: pacbio_data_processing.summary
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pacbio\_data\_processing.templates module
-----------------------------------------

.. automodule:: pacbio_data_processing.templates
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pacbio\_data\_processing.types module
-------------------------------------

.. automodule:: pacbio_data_processing.types
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pacbio\_data\_processing.utils module
-------------------------------------

.. automodule:: pacbio_data_processing.utils
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Module contents
---------------

.. automodule:: pacbio_data_processing
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