CHANGELOG.md
CONTRIBUTING.md
LICENSE
MANIFEST.in
README.md
SECURITY.md
pyproject.toml
examples/default_config.yaml
examples/refua_api_to_clinical_e2e.ipynb
examples/refua_integration_payload.json
src/refua_clinical/__init__.py
src/refua_clinical/__main__.py
src/refua_clinical/admet_integration.py
src/refua_clinical/analysis.py
src/refua_clinical/cli.py
src/refua_clinical/estimands.py
src/refua_clinical/explainability.py
src/refua_clinical/integrations.py
src/refua_clinical/io.py
src/refua_clinical/modality.py
src/refua_clinical/models.py
src/refua_clinical/object_api.py
src/refua_clinical/optimization.py
src/refua_clinical/pkpd.py
src/refua_clinical/protocol.py
src/refua_clinical/py.typed
src/refua_clinical/refua_bridge.py
src/refua_clinical/report.py
src/refua_clinical/research.py
src/refua_clinical/stopping.py
src/refua_clinical/transportability.py
src/refua_clinical/trial.py
src/refua_clinical/trial_management.py
src/refua_clinical/virtual_patients.py
src/refua_clinical/voi.py
src/refua_clinical.egg-info/PKG-INFO
src/refua_clinical.egg-info/SOURCES.txt
src/refua_clinical.egg-info/dependency_links.txt
src/refua_clinical.egg-info/entry_points.txt
src/refua_clinical.egg-info/requires.txt
src/refua_clinical.egg-info/top_level.txt
tests/test_advice.py
tests/test_analysis.py
tests/test_cli.py
tests/test_estimands_stopping.py
tests/test_io.py
tests/test_modality.py
tests/test_object_api.py
tests/test_optimization.py
tests/test_pkpd.py
tests/test_protocol.py
tests/test_public_api.py
tests/test_refua_bridge.py
tests/test_trial.py
tests/test_trial_management.py
tests/test_virtual_patients.py
tests/test_voi_transportability.py