Metadata-Version: 2.4
Name: pyCoReGraph
Version: 0.0.1a2
Summary: CoReGraph : Correlation-based dynamic gene Regulatory Graphs
Author-email: Joseph Léger <josephleger@outlook.fr>
License: MIT
Project-URL: Homepage, https://github.com/JosephLeger/CoReGraph
Project-URL: Repository, https://github.com/JosephLeger/CoReGraph
Project-URL: Issues, https://github.com/JosephLeger/CoReGraph/issues
Keywords: bioinformatics,single-cell,gene-regulatory-network,pseudotime,correlation,network-analysis,visualization
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Operating System :: OS Independent
Requires-Python: >=3.10
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: numpy>=1.24
Requires-Dist: pandas>=2.0
Requires-Dist: matplotlib>=3.7
Requires-Dist: networkx>=3.0
Requires-Dist: scipy>=1.10
Requires-Dist: tqdm>=4.65
Provides-Extra: dev
Requires-Dist: pytest>=8.0; extra == "dev"
Requires-Dist: build>=1.0; extra == "dev"
Requires-Dist: twine>=5.0; extra == "dev"
Requires-Dist: ruff>=0.4; extra == "dev"
Requires-Dist: black>=24.0; extra == "dev"
Requires-Dist: ipykernel>=6.0; extra == "dev"
Provides-Extra: notebook
Requires-Dist: jupyter>=1.0; extra == "notebook"
Requires-Dist: ipython>=8.0; extra == "notebook"
Provides-Extra: all
Requires-Dist: pytest>=8.0; extra == "all"
Requires-Dist: build>=1.0; extra == "all"
Requires-Dist: twine>=5.0; extra == "all"
Requires-Dist: ruff>=0.4; extra == "all"
Requires-Dist: black>=24.0; extra == "all"
Requires-Dist: ipykernel>=6.0; extra == "all"
Requires-Dist: jupyter>=1.0; extra == "all"
Requires-Dist: ipython>=8.0; extra == "all"
Dynamic: license-file

# CoReGraph : **Co**rrelation-based dynamic gene **Re**gulatory **Graph**s

A Python package for dynamic lagged gene correlation analysis along pseudotime trajectories.

## Requirments

```bash
python >= 3.10
```

## Installation

```bash
pip install pyCoReGraph
```
