Model : icg_liver

id icg_liver meta_icg_liver
nameicg_liver
timemin
substancemmole
extentmmole
volumelitre
aream2
lengthm
L3V1 comp-V1

Ports [15] name referenced element port ref id ref unit ref metaid ref sbo cvterm
mmole_port mmole_port mmole_port UnitDefinition: mmole mmole
min_port min_port min_port UnitDefinition: min min
m_port m_port m_port UnitDefinition: m m
m2_port m2_port m2_port UnitDefinition: m2 m2
mM_port mM_port mM_port UnitDefinition: mM mM
mmole_per_min_port mmole_per_min_port mmole_per_min_port UnitDefinition: mmole_per_min mmole_per_min
mmole_per_min_l_port mmole_per_min_l_port mmole_per_min_l_port UnitDefinition: mmole_per_min_l mmole_per_min_l
litre_per_min_port litre_per_min_port litre_per_min_port UnitDefinition: litre_per_min litre_per_min
per_min_port per_min_port per_min_port UnitDefinition: per_min per_min
Vext_port Vext_port Vext_port Compartment: Vext Vext
Vli_port Vli_port Vli_port Compartment: Vli Vli
Vbi_port Vbi_port Vbi_port Compartment: Vbi Vbi
Vfeces_port Vfeces_port Vfeces_port Compartment: Vfeces Vfeces
icg_ext_port icg_ext_port icg_ext_port Species: icg_ext icg_ext
icg_feces_port icg_feces_port icg_feces_port Species: icg_feces icg_feces

UnitDefinitions [9] name units sbo cvterm
mmole 10 3 mole
min 60 s
m m
m2 m 2
mM 10 3 mole litre
mmole_per_min 10 3 mole 60 s
mmole_per_min_l 10 3 mole litre 60 s
litre_per_min litre 60 s
per_min 1 60 s

Compartments [4] name size constant spatial dimensions units derived units sbo cvterm
Vext blood 4.0 3 litre litre
Vli liver 1.5 3 litre litre
Vbi bile 1.0 3 litre litre
Vfeces feces 1.0 3 litre litre

Species [5] name compartment hasOnlySubstanceUnits boundaryCondition constant initialAmount initialConcentration conversionFactor units substanceUnits derivedUnits sbo cvterm
bil_ext bilirubin (extern) Vext 0.01 mmole mmole 10 3 mole litre
icg_ext icg (extern) Vext 0.0 mmole mmole 10 3 mole litre
icg icg (liver) Vli 0.0 mmole mmole 10 3 mole litre
icg_bi icg (bile) Vbi 0.0 mmole mmole 10 3 mole litre
icg_feces icg (feces) Vfeces 0.0 mmole mmole 10 3 mole

Parameters [6] name constant value unit derived unit sbo cvterm uncertainties
ICGIM_Vmax 0.0224947931695564 mmole_per_min_l 10 3 mole litre 60 s
ICGIM_Km 0.0139278516554828 mM 10 3 mole litre
ICGIM_ki_bil 0.02 mM 10 3 mole litre
ICGLI2CA_Vmax 0.000957515650206951 mmole_per_min_l 10 3 mole litre 60 s
ICGLI2CA_Km 0.0118484051192037 mM 10 3 mole litre
ICGLI2BI_Vmax 0.000114465458057661 per_min 1 60 s

Reactions [3] name equation modifiers kinetic law derived units sbo cvterm
ICGIM ICG import
icg_ext ➞ icg bil_ext ICGIM_Vmax Vli icg_ext ICGIM_Km 1 bil_ext ICGIM_ki_bil icg_ext 0.001 mole 60 s
ICGLI2CA ICG export (bile)
icg ➞ icg_bi ICGLI2CA_Vmax Vli icg ICGLI2CA_Km icg 0.001 mole 60 s
ICGLI2BI ICG bile transport
icg_bi ➞ icg_feces ICGLI2BI_Vmax Vli icg_bi 10 3 mole 60 s