LICENSE
README.md
pyproject.toml
src/BPfold/__init__.py
src/BPfold/evaluate.py
src/BPfold/kit.py
src/BPfold/predict.py
src/BPfold.egg-info/PKG-INFO
src/BPfold.egg-info/SOURCES.txt
src/BPfold.egg-info/dependency_links.txt
src/BPfold.egg-info/entry_points.txt
src/BPfold.egg-info/top_level.txt
src/BPfold/configs/config.yaml
src/BPfold/dataset/RNAseq.py
src/BPfold/dataset/__init__.py
src/BPfold/model/BPfoldNet.py
src/BPfold/model/__init__.py
src/BPfold/model/loss_and_metric.py
src/BPfold/model/pos_embed.py
src/BPfold/paras/key.energy
src/BPfold/util/RNA_kit.py
src/BPfold/util/__init__.py
src/BPfold/util/base_pair_motif.py
src/BPfold/util/base_pair_probability.py
src/BPfold/util/data_sampler.py
src/BPfold/util/hook_features.py
src/BPfold/util/misc.py
src/BPfold/util/postprocess.py
src/BPfold/util/yaml_config.py