pyemb

Contents:

  • Installation and Overview
  • Tutorials
    • MIMIC-III
    • Lyon school graph
    • 20Newsgroup documents
    • Planaria single-cell
  • API
  • Contributors and References
pyemb
  • Tutorials
  • View page source

Tutorials

Here are a few examples of how to use the library.

  • MIMIC-III
    • Data load
  • Lyon school graph
    • Load dataset
    • Embed the dynamic network
    • A quick interactive and animated plot to explore your embedding
    • Visualise embedding time point snapshots of interest
    • Degree-correct the embedding
    • Independent spectral embedding
    • Omnibus embedding (OMNI)
    • UASE
    • URLSE
  • 20Newsgroup documents
    • Introduction
    • Data load
    • PCA and tSNE
    • Hierarchical clustering with dot products [2]
    • On centroids
    • On documents
    • References
  • Planaria single-cell
    • Load data
    • Dimension selection and visualisation
    • Construct tree
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