smftools/__init__.py,sha256=pWcysCXCokCdW4YySaA8BMumZkE56m15otMPG88nQGc,444
smftools/_settings.py,sha256=a1uYWNBNtQb30cGSdpjeiIMnQV1Fip7IZAQrNzjXR5w,324
smftools/readwrite.py,sha256=p-K_RYOrM0vDawBTcuCUyuwVzmYwJqNMvhv9fCTLDKE,4159
smftools/datasets/F1_hybrid_NKG2A_enhander_promoter_GpC_conversion_SMF.h5ad.gz,sha256=q6wJtgFRDln0o20XNCx1qad3lwcdCoylqPN7wskTfI8,2926497
smftools/datasets/__init__.py,sha256=xkSTlPuakVYVCuRurif9BceNBDt6bsngJvvjI8757QI,142
smftools/datasets/dCas9_m6A_invitro_kinetics.h5ad.gz,sha256=niOcVHaYY7h3XyvwSkN-V_NMBaRt2vTP5TrJO0CwMCs,8385050
smftools/datasets/datasets.py,sha256=rAcp7_Raa8Uv95DISj-oACY1fE_5fIfb5Poj-9WVOWo,473
smftools/informatics/__init__.py,sha256=Bjufdncl978d-tNriuRHX92mjeAO5axjTlZP7iePjms,235
smftools/informatics/pod5_conversion.py,sha256=m_qNRSNeUndl5KO8PJPMLCOWqcVq-TJSvoyUnJW-UHE,1399
smftools/informatics/pod5_direct.py,sha256=MGQkpHI2qQuEO0IDFOiXjL0Pq59oC1DwUaIWH7jTHiU,1707
smftools/informatics/pod5_to_adata.py,sha256=R31bkGbparRGpYpTZ69znQThK1xCGChlf4oP836IC9Y,722
smftools/informatics/readwrite.py,sha256=p-K_RYOrM0vDawBTcuCUyuwVzmYwJqNMvhv9fCTLDKE,4159
smftools/informatics/helpers/__init__.py,sha256=ws8Zyxin68L7G5R9Rna_qoBnkSNOaD1ndlcrooV2d-k,1466
smftools/informatics/helpers/align_BAM.py,sha256=vZpkbI-mUqd6qJaovRhuNM03s816fjd5hNEcfA0oHxo,1414
smftools/informatics/helpers/binarize_converted_base_identities.py,sha256=rTdk06BmU_bvuE1NOU1LGSQs9ytkl7vQjZcwMbA5Yx0,1409
smftools/informatics/helpers/canoncall.py,sha256=Ujz0Pkp_wW-XJyb3uB2fzVpB12c2MCOWVTg_uIOQL8c,397
smftools/informatics/helpers/converted_BAM_to_adata.py,sha256=7tntnkTZpNqS0WTMbO42ksxXqzk9NFpXK0q6uWSqtkM,8593
smftools/informatics/helpers/count_aligned_reads.py,sha256=Q9iU0zwwNZRn0oOxRl_x5OAF7YgaRkSpQBojaBccQsI,1814
smftools/informatics/helpers/extract_base_identities.py,sha256=nrQy8cUyOA2C8cKKL6SpZ97U0ZGhChw8Qdk0BwuxIT4,2406
smftools/informatics/helpers/extract_mods.py,sha256=IQdpQxh_2NStKK4kIVKa8UAcV-fVJSs_bzB3JLe0Jx4,1602
smftools/informatics/helpers/find_conversion_sites.py,sha256=aer63p2JHqaoB3wSK9xqpSjow7w7UyrMSJ06aKTQSiQ,3208
smftools/informatics/helpers/generate_converted_FASTA.py,sha256=xHjspkeCiSKjqb6zUrjCG13OKW597LJ4_w33tg-wFok,3006
smftools/informatics/helpers/get_native_references.py,sha256=wx_RXnPwj0NGp7Tx1_hXyO8ZzQJHZwa0b3a6r3266FY,976
smftools/informatics/helpers/informatics.py,sha256=gKb2ZJ_LcAeEXuQqn9e-QDF_sS4tMpMTr2vZlqa7n54,14572
smftools/informatics/helpers/load_adata.py,sha256=DhvYYqO9VLsZqhL1WjN9sd-e3fgvdXGlgTP18z1h0L0,33654
smftools/informatics/helpers/load_experiment_config.py,sha256=boF524jZZKzBjc2yvAiMYvhM4OW_efXSbwU-nINKDdg,607
smftools/informatics/helpers/make_dirs.py,sha256=UxghbuquyXgDD-H24Ghf1B7Kfpdt04NgMs8GE6zSJ3U,475
smftools/informatics/helpers/make_modbed.py,sha256=m1lQUbw0W63YjiM_Tmy6QOL3GkHgvSuCrkX2Bo8sCco,741
smftools/informatics/helpers/modQC.py,sha256=C-WVaoLN7Dxh--JcWa4UXzhwFpf0AXrFA99IsxfVXwo,770
smftools/informatics/helpers/modcall.py,sha256=f41SkaXi2fYgv7B0oAFwj-9CZ0XVhvzWHfe977rT0wQ,493
smftools/informatics/helpers/modkit_extract_to_adata.py,sha256=TvIHDXWTO2QxArGyIU3w-dQBVyq0rQ1A4iMvV9Rb_7A,24407
smftools/informatics/helpers/one_hot_encode.py,sha256=jxfTNREED0YhdvwhVmRrt2BZUfiOrOUURVSOVtGypns,439
smftools/informatics/helpers/separate_bam_by_bc.py,sha256=AFT-v0XXuW2rRYG6FC-8gulhAA6a4YGAa0UEuMDlimc,1235
smftools/informatics/helpers/split_and_index_BAM.py,sha256=HqPAy5YxK0jokCWCUlUIWSLf2n-Gubkge-xxYfX4XLE,755
smftools/plotting/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
smftools/preprocessing/__init__.py,sha256=ngs4XYcd9gSXwSa-gi1pWMblCRJ_uZo5MMkg5vuhDOU,1438
smftools/preprocessing/append_C_context.py,sha256=sfHiV3gBOum3KyZ6wFOCUcDUieW9rra3hKFkWEb8wmk,2063
smftools/preprocessing/binarize_on_Youden.py,sha256=CO0KnxxHmCwq7tlrBh7BuY0_6SEacR7NwRhkwaWoVUg,2056
smftools/preprocessing/binary_layers_to_ohe.py,sha256=zahq1YcgAeva-b1CcEVaBK4XaNmMgE6IpfiedYepI5k,876
smftools/preprocessing/calculate_complexity.py,sha256=H4j0mCWL-jFWZ8UoTGa5lNEcqByfwIDtlsJrpNRNkg4,2751
smftools/preprocessing/calculate_converted_read_methylation_stats.py,sha256=ZIOKGkbWI15RzpnfgWU4MUXFz3LlUjL_yjodGrye8-A,2626
smftools/preprocessing/calculate_coverage.py,sha256=Q-RjTqbYt9jc-Axk807_h0m7_oDFdewrO805FQARLUA,1852
smftools/preprocessing/calculate_pairwise_hamming_distances.py,sha256=l0IYlWu9RCDq4R2pJm_qGXN_RyFkIuah9fFLvg1Hti0,843
smftools/preprocessing/calculate_position_Youden.py,sha256=FUSsrhp8L8TLoJaX2cSl8u1phNbYpTRJfVqsrwMOWgY,6008
smftools/preprocessing/calculate_read_length_stats.py,sha256=kKcEw4zS-GnJ2nyC5c24YVMY2oBmxmcxjPWLGnrkwws,1711
smftools/preprocessing/clean_NaN.py,sha256=HCRX_nA6H3o7CysCa6yxN07xQEoh6LvdkX7aAYqSKR8,1024
smftools/preprocessing/filter_converted_reads_on_methylation.py,sha256=krqDb6TNjQx4IICXbEQ8SDcaSjrWZ-9ChtaEiIxU5KY,962
smftools/preprocessing/filter_reads_on_length.py,sha256=-tXMIpg8Mx8GskCfjBy0ZBczuJRTZdyuSZtDyb6KDJs,1737
smftools/preprocessing/invert_adata.py,sha256=vpR0jynLODhE8mpiHZQIv1XUY9pd7cEG0ujC-GArXIE,616
smftools/preprocessing/mark_duplicates.py,sha256=Qd1fluCHkL7ZAY37wGmBe40HwkRipOkbDAp6lnoLU9I,6818
smftools/preprocessing/min_non_diagonal.py,sha256=o79E5xy-aO-cSwN5dUVi5oj8_EfQBDPcj1D0_7fvk1Q,644
smftools/preprocessing/preprocessing.py,sha256=4mLT09A7vwRZ78FHmuwtv38mH9TQ9qrZc_WjHRhhkIw,34379
smftools/preprocessing/remove_duplicates.py,sha256=sgdRjZSLakocTRwAukdp1RpFhODbeOjNN_EWZkTshAc,395
smftools/tools/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
smftools-0.1.0.dist-info/METADATA,sha256=Loh3iFQgPLn6Xe_WdbeATlGiMqggFaYJOqgwf5e8WRI,3422
smftools-0.1.0.dist-info/WHEEL,sha256=1yFddiXMmvYK7QYTqtRNtX66WJ0Mz8PYEiEUoOUUxRY,87
smftools-0.1.0.dist-info/licenses/LICENSE,sha256=F8LwmL6vMPddaCt1z1S83Kh_OZv50alTlY7BvVx1RXw,1066
smftools-0.1.0.dist-info/RECORD,,
