LICENSE.md
MANIFEST.in
README.md
setup.py
ivadomed/__init__.py
ivadomed/config_manager.py
ivadomed/evaluation.py
ivadomed/inference.py
ivadomed/keywords.py
ivadomed/losses.py
ivadomed/main.py
ivadomed/maths.py
ivadomed/metrics.py
ivadomed/mixup.py
ivadomed/models.py
ivadomed/postprocessing.py
ivadomed/preprocessing.py
ivadomed/testing.py
ivadomed/training.py
ivadomed/transforms.py
ivadomed/uncertainty.py
ivadomed/utils.py
ivadomed/version.txt
ivadomed/visualize.py
ivadomed.egg-info/PKG-INFO
ivadomed.egg-info/SOURCES.txt
ivadomed.egg-info/dependency_links.txt
ivadomed.egg-info/entry_points.txt
ivadomed.egg-info/requires.txt
ivadomed.egg-info/top_level.txt
ivadomed/config/config.json
ivadomed/config/config_bids.json
ivadomed/config/config_classification.json
ivadomed/config/config_default.json
ivadomed/config/config_microscopy.json
ivadomed/config/config_sctTesting.json
ivadomed/config/config_small.json
ivadomed/config/config_spineGeHemis.json
ivadomed/config/config_tumorSeg.json
ivadomed/config/config_vertebral_labeling.json
ivadomed/config/contrast_dct.json
ivadomed/loader/__init__.py
ivadomed/loader/balanced_sampler.py
ivadomed/loader/bids3d_dataset.py
ivadomed/loader/bids_dataframe.py
ivadomed/loader/bids_dataset.py
ivadomed/loader/film.py
ivadomed/loader/loader.py
ivadomed/loader/mri2d_segmentation_dataset.py
ivadomed/loader/mri3d_subvolume_segmentation_dataset.py
ivadomed/loader/patch_filter.py
ivadomed/loader/sample_meta_data.py
ivadomed/loader/segmentation_pair.py
ivadomed/loader/slice_filter.py
ivadomed/loader/utils.py
ivadomed/object_detection/__init__.py
ivadomed/object_detection/utils.py
ivadomed/scripts/__init__.py
ivadomed/scripts/automate_training.py
ivadomed/scripts/compare_models.py
ivadomed/scripts/convert_to_onnx.py
ivadomed/scripts/download_data.py
ivadomed/scripts/extract_small_dataset.py
ivadomed/scripts/prepare_dataset_vertebral_labeling.py
ivadomed/scripts/segment_image.py
ivadomed/scripts/training_curve.py
ivadomed/scripts/visualize_and_compare_testing_models.py
ivadomed/scripts/visualize_transforms.py
testing/__init__.py
testing/common_testing_util.py
testing/functional_tests/__init__.py
testing/functional_tests/t_template.py
testing/functional_tests/t_utils.py
testing/functional_tests/test_automate_training.py
testing/functional_tests/test_compare_models.py
testing/functional_tests/test_convert_to_onnx.py
testing/functional_tests/test_download_data.py
testing/functional_tests/test_extract_small_dataset.py
testing/functional_tests/test_prepare_dataset_vertebral_labelling.py
testing/functional_tests/test_segment_volume.py
testing/functional_tests/test_training_3d.py
testing/functional_tests/test_training_curve.py
testing/functional_tests/test_visualize_transforms.py
testing/unit_tests/__init__.py
testing/unit_tests/t_template.py
testing/unit_tests/t_utils.py
testing/unit_tests/test_automate_training.py
testing/unit_tests/test_bounding_box.py
testing/unit_tests/test_loader.py
testing/unit_tests/test_losses.py
testing/unit_tests/test_main.py
testing/unit_tests/test_metrics.py
testing/unit_tests/test_mixup.py
testing/unit_tests/test_model.py
testing/unit_tests/test_onnx.py
testing/unit_tests/test_orientation.py
testing/unit_tests/test_patch_filter.py
testing/unit_tests/test_postprocessing.py
testing/unit_tests/test_rgb.py
testing/unit_tests/test_sampler.py
testing/unit_tests/test_slice_filter.py
testing/unit_tests/test_split_dataset.py
testing/unit_tests/test_tensorboard_save.py
testing/unit_tests/test_testing.py
testing/unit_tests/test_training_time.py
testing/unit_tests/test_transfer_learning.py
testing/unit_tests/test_transforms.py
testing/unit_tests/test_utils.py