CAZyme Annotation
=========================

The purpose of this step is to annotate CAZymes based on the input process results.

Will automatically use the 'uniInput.faa' file from the output folder which is generated by input_process (previous step). 

Could use "--methods"  to choose different combination of tools from "diamond", "hmm", and "dbCANsub". 

.. code-block:: shell

    run_dbcan CAZyme_annotation  --out_dir output_EscheriaColiK12MG1655_fna --db_dir

.. code-block:: shell

    run_dbcan CAZyme_annotation  --out_dir output_EscheriaColiK12MG1655_faa --db_dir

.. code-block:: shell

    run_dbcan CAZyme_annotation  --out_dir output_Xylona_heveae_TC161_faa --db_dir

.. code-block:: shell

    run_dbcan CAZyme_annotation  --out_dir output_Xylhe1_faa --db_dir

