absl-py==2.1.0
aiohappyeyeballs==2.4.4
aiohttp==3.11.11
aiosignal==1.3.2
anndata==0.10.8
anyio==4.8.0
argon2-cffi==23.1.0
argon2-cffi-bindings==21.2.0
array_api_compat==1.10.0
arrow==1.3.0
asttokens==3.0.0
async-lru==2.0.4
async-timeout==5.0.1
attrs==25.1.0
babel==2.17.0
beautifulsoup4==4.13.3
bleach==6.2.0
cell2location==0.1.4
certifi==2025.1.31
cffi==1.17.1
charset-normalizer==3.4.1
chex==0.1.88
click==8.1.8
colorama==0.4.6
comm==0.2.2
contextlib2==21.6.0
contourpy==1.3.0
cycler==0.12.1
debugpy==1.8.12
decorator==5.1.1
defusedxml==0.7.1
docrep==0.3.2
etils==1.5.2
exceptiongroup==1.2.2
executing==2.2.0
fastjsonschema==2.21.1
filelock==3.17.0
flax==0.8.5
fonttools==4.55.3
fqdn==1.5.1
frozenlist==1.5.0
fsspec==2025.2.0
get-annotations==0.1.2
h11==0.14.0
h5py==3.12.1
httpcore==1.0.7
httpx==0.28.1
humanize==4.11.0
idna==3.10
importlib_metadata==8.6.1
importlib_resources==6.5.2
ipykernel==6.29.5
ipython==8.18.1
isoduration==20.11.0
jax==0.4.29
jaxlib==0.4.29
jedi==0.19.2
Jinja2==3.1.5
joblib==1.4.2
json5==0.10.0
jsonpointer==3.0.0
jsonschema==4.23.0
jsonschema-specifications==2024.10.1
jupyter-events==0.12.0
jupyter-lsp==2.2.5
jupyter_client==8.6.3
jupyter_core==5.7.2
jupyter_server==2.15.0
jupyter_server_terminals==0.5.3
jupyterlab==4.3.5
jupyterlab_pygments==0.3.0
jupyterlab_server==2.27.3
kaleido==0.1.0.a3
kiwisolver==1.4.7
ks==0.1
legacy-api-wrap==1.4.1
lightning==2.5.0.post0
lightning-utilities==0.12.0
llvmlite==0.43.0
markdown-it-py==3.0.0
MarkupSafe==3.0.2
matplotlib==3.9.4
matplotlib-inline==0.1.7
mdurl==0.1.2
memory-profiler==0.61.0
mistune==3.1.1
ml-collections==0.1.1
ml_dtypes==0.5.1
mpmath==1.3.0
msgpack==1.1.0
mudata==0.2.4
multidict==6.1.0
multipledispatch==1.0.0
NaiveDE==1.2.0
natsort==8.4.0
nbclient==0.10.2
nbconvert==7.16.6
nbformat==5.10.4
nest-asyncio==1.6.0
networkx==3.2.1
notebook==7.3.2
notebook_shim==0.2.4
numba==0.60.0
numpy==1.26.4
numpyro==0.16.1
opencv-python==4.11.0.86
opt_einsum==3.4.0
optax==0.2.4
orbax-checkpoint==0.6.4
overrides==7.7.0
packaging==24.2
pandas==2.2.3
pandocfilters==1.5.1
parso==0.8.4
patsy==1.0.1
pillow==11.1.0
platformdirs==4.3.6
plotly==5.24.1
prometheus_client==0.21.1
prompt_toolkit==3.0.50
propcache==0.2.1
protobuf==5.29.3
psutil==6.1.1
pure_eval==0.2.3
pycparser==2.22
Pygments==2.19.1
pynndescent==0.5.13
pyparsing==3.2.1
pyro-api==0.1.2
pyro-ppl==1.9.1
python-dateutil==2.9.0.post0
python-json-logger==3.2.1
pytorch-lightning==2.5.0.post0
pytz==2024.2
PyYAML==6.0.2
pyzmq==26.2.1
referencing==0.36.2
requests==2.32.3
rfc3339-validator==0.1.4
rfc3986-validator==0.1.1
rich==13.9.4
rpds-py==0.22.3
scanpy==1.10.3
scikit-learn==1.6.1
scipy==1.10.0
scvi-tools==1.1.6.post2
seaborn==0.13.2
Send2Trash==1.8.3
session-info==1.0.0
six==1.17.0
sniffio==1.3.1
soupsieve==2.6
SpatialDE==1.1.3
stack-data==0.6.3
statsmodels==0.14.4
stdlib-list==0.11.0
sympy==1.13.1
tangram==0.7.0
tenacity==9.0.0
tensorstore==0.1.69
terminado==0.18.1
threadpoolctl==3.5.0
tinycss2==1.4.0
tomli==2.2.1
toolz==1.0.0
torch==2.6.0
torchmetrics==1.6.1
tornado==6.4.2
tqdm==4.67.1
traitlets==5.14.3
types-python-dateutil==2.9.0.20241206
typing_extensions==4.12.2
tzdata==2024.2
tzlocal==5.2
umap-learn==0.5.7
uri-template==1.3.0
urllib3==2.3.0
wcwidth==0.2.13
webcolors==24.11.1
webencodings==0.5.1
websocket-client==1.8.0
yarl==1.18.3
zipp==3.21.0
