LICENCE
README.md
setup.py
./LICENCE
./stcrpy/tcr_geometry/TCRCoM_LICENCE
examples/__init__.py
examples/egnn.py
stcrpy/__init__.py
stcrpy.egg-info/PKG-INFO
stcrpy.egg-info/SOURCES.txt
stcrpy.egg-info/dependency_links.txt
stcrpy.egg-info/requires.txt
stcrpy.egg-info/top_level.txt
stcrpy/tcr_datasets/__init__.py
stcrpy/tcr_datasets/tcr_graph_dataset.py
stcrpy/tcr_datasets/tcr_selector.py
stcrpy/tcr_datasets/tcr_structure_dataset.py
stcrpy/tcr_datasets/utils.py
stcrpy/tcr_formats/__init__.py
stcrpy/tcr_formats/tcr_formats.py
stcrpy/tcr_formats/tcr_haddock.py
stcrpy/tcr_geometry/TCRCoM.py
stcrpy/tcr_geometry/TCRCoM_LICENCE
stcrpy/tcr_geometry/TCRDock.py
stcrpy/tcr_geometry/TCRGeom.py
stcrpy/tcr_geometry/TCRGeomFiltering.py
stcrpy/tcr_geometry/__init__.py
stcrpy/tcr_geometry/reference_data/__init__.py
stcrpy/tcr_geometry/reference_data/dock_reference_1_imgt_numbered.pdb
stcrpy/tcr_geometry/reference_data/dock_reference_2_imgt_numbered.pdb
stcrpy/tcr_geometry/reference_data/reference_A.pdb
stcrpy/tcr_geometry/reference_data/reference_B.pdb
stcrpy/tcr_geometry/reference_data/reference_D.pdb
stcrpy/tcr_geometry/reference_data/reference_G.pdb
stcrpy/tcr_geometry/reference_data/reference_data.py
stcrpy/tcr_interactions/PLIPParser.py
stcrpy/tcr_interactions/TCRInteractionProfiler.py
stcrpy/tcr_interactions/TCRpMHC_PLIP_Model_Parser.py
stcrpy/tcr_interactions/__init__.py
stcrpy/tcr_interactions/utils.py
stcrpy/tcr_methods/__init__.py
stcrpy/tcr_methods/tcr_batch_operations.py
stcrpy/tcr_methods/tcr_methods.py
stcrpy/tcr_methods/tcr_reformatting.py
stcrpy/tcr_metrics/__init__.py
stcrpy/tcr_metrics/constants.py
stcrpy/tcr_metrics/tcr_interface_rmsd.py
stcrpy/tcr_metrics/tcr_rmsd.py
stcrpy/tcr_ml/__init__.py
stcrpy/tcr_ml/geometry_predictor.py
stcrpy/tcr_processing/AGchain.py
stcrpy/tcr_processing/Chemical_components.py
stcrpy/tcr_processing/Entity.py
stcrpy/tcr_processing/Fragment.py
stcrpy/tcr_processing/Holder.py
stcrpy/tcr_processing/MHC.py
stcrpy/tcr_processing/MHCchain.py
stcrpy/tcr_processing/Model.py
stcrpy/tcr_processing/Select.py
stcrpy/tcr_processing/TCR.py
stcrpy/tcr_processing/TCRIO.py
stcrpy/tcr_processing/TCRParser.py
stcrpy/tcr_processing/TCRStructure.py
stcrpy/tcr_processing/TCRchain.py
stcrpy/tcr_processing/__init__.py
stcrpy/tcr_processing/annotate.py
stcrpy/tcr_processing/utils/__init__.py
stcrpy/tcr_processing/utils/common.py
stcrpy/tcr_processing/utils/constants.py
stcrpy/tcr_processing/utils/region_definitions.py
stcrpy/utils/__init__.py
stcrpy/utils/error_stream.py
test/test_annotations.py
test/test_tcr_datasets.py
test/test_tcr_formats.py
test/test_tcr_geometry.py
test/test_tcr_geometry_filters.py
test/test_tcr_interactions.py
test/test_tcr_methods.py
test/test_tcr_metrics.py
test/test_tcr_processing.py
test/test_tcr_sequence_operations.py