Metadata-Version: 2.4
Name: piaso-tools
Version: 1.0.3
Summary: Precise Integrative Analysis of Single-cell Omics.
Project-URL: Documentation, https://piaso.org
Project-URL: Source, https://github.com/genecell/PIASO
Project-URL: Homepage, https://piaso.org
Author-email: Min Dai <dai@broadinstitute.org>
Maintainer-email: Min Dai <dai@broadinstitute.org>, Vallari Shende <vshende@broadinstitute.org>
License-Expression: BSD-3-Clause
License-File: LICENSE
Classifier: Development Status :: 5 - Production/Stable
Classifier: Environment :: Console
Classifier: Framework :: Jupyter
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX :: Linux
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Visualization
Requires-Python: >=3.9
Requires-Dist: anndata>=0.8
Requires-Dist: cosg>=1.0.3
Requires-Dist: matplotlib>=3.5.2
Requires-Dist: numpy>=1.21.6
Requires-Dist: pandas>=1.4.4
Requires-Dist: requests
Requires-Dist: scanpy>=1.9.1
Requires-Dist: scikit-learn>=1.1
Requires-Dist: scipy>=1.7.3
Requires-Dist: seaborn>=0.11.2
Requires-Dist: statsmodels>=0.13.2
Requires-Dist: tqdm
Requires-Dist: typing-extensions
Provides-Extra: dev
Requires-Dist: pre-commit; extra == 'dev'
Description-Content-Type: text/markdown

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# PIASO

#### Precise Integrative Analysis of Single-cell Omics

### Documentation

[piaso.org](https:///piaso.org) 

### Installation

Install from PyPI (stable release):
```bash
pip install piaso-tools
```
Install from GitHub (latest development version):
```bash
pip install git+https://github.com/genecell/PIASO.git
```

### Citation

If PIASO is useful for your research, please consider citing Wu, S.J., Dai, M. *et al*. Pyramidal neurons proportionately alter cortical interneuron subtypes. *Nature* (2026). https://doi.org/10.1038/s41586-025-09996-8

### Contact
Min Dai
dai@broadinstitute.org
