LICENSE
MANIFEST.in
README.md
pyproject.toml
src/biogeme/README.txt
src/biogeme/__init__.py
src/biogeme/assisted.py
src/biogeme/audit_tuple.py
src/biogeme/biogeme.py
src/biogeme/biogeme.py.keep
src/biogeme/biogeme.pyi
src/biogeme/biogeme_logging.py
src/biogeme/check_parameters.py
src/biogeme/cnl.py
src/biogeme/constants.py
src/biogeme/default_parameters.py
src/biogeme/deprecated.py
src/biogeme/dict_of_formulas.py
src/biogeme/distributions.py
src/biogeme/exceptions.py
src/biogeme/expressions_registry.py
src/biogeme/filenames.py
src/biogeme/floating_point.py
src/biogeme/function_output.py
src/biogeme/loglikelihood.py
src/biogeme/lsh.py
src/biogeme/monte_carlo_diagnostic.py
src/biogeme/multiobjectives.py
src/biogeme/nests.py
src/biogeme/optimization.py
src/biogeme/parameters.py
src/biogeme/partition.py
src/biogeme/pymc_calculator.py
src/biogeme/results.py
src/biogeme/second_derivatives.py
src/biogeme/validity.py
src/biogeme/version.py
src/biogeme.egg-info/PKG-INFO
src/biogeme.egg-info/SOURCES.txt
src/biogeme.egg-info/dependency_links.txt
src/biogeme.egg-info/requires.txt
src/biogeme.egg-info/top_level.txt
src/biogeme/__pycache__/__init__.cpython-314.pyc
src/biogeme/__pycache__/deprecated.cpython-314.pyc
src/biogeme/__pycache__/exceptions.cpython-314.pyc
src/biogeme/__pycache__/version.cpython-314.pyc
src/biogeme/bayesian_estimation/__init__.py
src/biogeme/bayesian_estimation/bayesian_results.py
src/biogeme/bayesian_estimation/bayesian_results_summary.py
src/biogeme/bayesian_estimation/check_shape.py
src/biogeme/bayesian_estimation/html_output.py
src/biogeme/bayesian_estimation/pandas_output.py
src/biogeme/bayesian_estimation/raw_bayesian_results.py
src/biogeme/bayesian_estimation/sampling.py
src/biogeme/bayesian_estimation/sampling_strategy.py
src/biogeme/catalog/__init__.py
src/biogeme/catalog/catalog.py
src/biogeme/catalog/catalog_iterator.py
src/biogeme/catalog/central_controller.py
src/biogeme/catalog/configuration.py
src/biogeme/catalog/controller.py
src/biogeme/catalog/generic_alt_specific_catalog.py
src/biogeme/catalog/segmentation_catalog.py
src/biogeme/catalog/specification.py
src/biogeme/data/__init__.py
src/biogeme/data/mdcev_data.py
src/biogeme/data/optima.py
src/biogeme/data/swissmetro.py
src/biogeme/data/data/mdcev.csv
src/biogeme/data/data/optima.dat
src/biogeme/data/data/swissmetro.dat
src/biogeme/database/#prompt.txt#
src/biogeme/database/__init__.py
src/biogeme/database/audit.py
src/biogeme/database/container.py
src/biogeme/database/mdcev.py
src/biogeme/database/panel.py
src/biogeme/database/panel_map.py
src/biogeme/database/prompt.txt
src/biogeme/database/sampling.py
src/biogeme/draws/__init__.py
src/biogeme/draws/factory.py
src/biogeme/draws/generators.py
src/biogeme/draws/management.py
src/biogeme/draws/native_draws.py
src/biogeme/draws/pymc_draws.py
src/biogeme/expressions/__init__.py
src/biogeme/expressions/add_prefix_suffix.py
src/biogeme/expressions/audit.py
src/biogeme/expressions/base_expressions.py
src/biogeme/expressions/bayesian.py
src/biogeme/expressions/belongs_to.py
src/biogeme/expressions/beta_parameters.py
src/biogeme/expressions/binary_expressions.py
src/biogeme/expressions/binary_max.py
src/biogeme/expressions/binary_min.py
src/biogeme/expressions/boxcox.py
src/biogeme/expressions/collectors.py
src/biogeme/expressions/comparison_expressions.py
src/biogeme/expressions/conditional_sum.py
src/biogeme/expressions/convert.py
src/biogeme/expressions/cos.py
src/biogeme/expressions/deprecated.py
src/biogeme/expressions/derive.py
src/biogeme/expressions/distributed_parameter.py
src/biogeme/expressions/divide.py
src/biogeme/expressions/draws.py
src/biogeme/expressions/elem.py
src/biogeme/expressions/elementary_expressions.py
src/biogeme/expressions/elementary_types.py
src/biogeme/expressions/exp.py
src/biogeme/expressions/expm1.py
src/biogeme/expressions/individual_draws.py
src/biogeme/expressions/integrate.py
src/biogeme/expressions/jax_utils.py
src/biogeme/expressions/linear_utility.py
src/biogeme/expressions/log.py
src/biogeme/expressions/log_cross_nested.py
src/biogeme/expressions/log_domain_cnl.py
src/biogeme/expressions/log_nested.py
src/biogeme/expressions/log_sampled_cross_nested.py
src/biogeme/expressions/log_sampled_logit.py
src/biogeme/expressions/log_sampled_nested.py
src/biogeme/expressions/logical_and.py
src/biogeme/expressions/logical_or.py
src/biogeme/expressions/logit_expressions.py
src/biogeme/expressions/logzero.py
src/biogeme/expressions/minus.py
src/biogeme/expressions/montecarlo.py
src/biogeme/expressions/multiple_expressions.py
src/biogeme/expressions/multiple_product.py
src/biogeme/expressions/multiple_sum.py
src/biogeme/expressions/named_expression.py
src/biogeme/expressions/normalcdf.py
src/biogeme/expressions/numeric_expressions.py
src/biogeme/expressions/numeric_tools.py
src/biogeme/expressions/ordered.py
src/biogeme/expressions/panel_likelihood_trajectory.py
src/biogeme/expressions/panel_log_likelihood.py
src/biogeme/expressions/parameter_overrides.py
src/biogeme/expressions/plus.py
src/biogeme/expressions/power.py
src/biogeme/expressions/power_constant.py
src/biogeme/expressions/prepare_for_panel.py
src/biogeme/expressions/random_variable.py
src/biogeme/expressions/rename_variables.py
src/biogeme/expressions/set_panel_id.py
src/biogeme/expressions/sin.py
src/biogeme/expressions/sparse_log_cross_nested.py
src/biogeme/expressions/times.py
src/biogeme/expressions/unary_expressions.py
src/biogeme/expressions/unary_minus.py
src/biogeme/expressions/validation.py
src/biogeme/expressions/variable.py
src/biogeme/expressions/visitor.py
src/biogeme/expressions/weighted_logsum_exp.py
src/biogeme/jax_calculator/__init__.py
src/biogeme/jax_calculator/function_call.py
src/biogeme/jax_calculator/multiple_formula.py
src/biogeme/jax_calculator/simple_formula.py
src/biogeme/jax_calculator/single_formula.py
src/biogeme/latent_variables/__init__.py
src/biogeme/latent_variables/biogeme_builder.py
src/biogeme/latent_variables/context.py
src/biogeme/latent_variables/html_report.py
src/biogeme/latent_variables/io.py
src/biogeme/latent_variables/latex_report.py
src/biogeme/latent_variables/model_spec.py
src/biogeme/latent_variables/naming.py
src/biogeme/latent_variables/normalization_plan.py
src/biogeme/latent_variables/normalization_refs.py
src/biogeme/latent_variables/python_generator.py
src/biogeme/latent_variables/resolved.py
src/biogeme/latent_variables/resolver.py
src/biogeme/latent_variables/tex_utils.py
src/biogeme/latent_variables/validation.py
src/biogeme/latent_variables_old/__init__.py
src/biogeme/latent_variables_old/latent_variables.py
src/biogeme/latent_variables_old/likert_indicators.py
src/biogeme/latent_variables_old/structural_equation.py
src/biogeme/latent_variables_old/builders/__init__.py
src/biogeme/latent_variables_old/builders/context.py
src/biogeme/latent_variables_old/builders/latent_indicator.py
src/biogeme/latent_variables_old/builders/measurement.py
src/biogeme/latent_variables_old/builders/measurement_gaussian.py
src/biogeme/latent_variables_old/builders/measurement_ordinal.py
src/biogeme/latent_variables_old/builders/naming.py
src/biogeme/latent_variables_old/builders/positive_parameter.py
src/biogeme/latent_variables_old/builders/result.py
src/biogeme/latent_variables_old/builders/structural.py
src/biogeme/latent_variables_old/builders/thresholds.py
src/biogeme/latent_variables_old/builders/utils.py
src/biogeme/latent_variables_old/normalization/__init__.py
src/biogeme/latent_variables_old/normalization/parameter_refs.py
src/biogeme/latent_variables_old/normalization/plan.py
src/biogeme/latent_variables_old/normalization/validation.py
src/biogeme/latent_variables_old/normalization_advisor/__init__.py
src/biogeme/latent_variables_old/normalization_advisor/advisor.py
src/biogeme/latent_variables_old/normalization_advisor/analyzer.py
src/biogeme/latent_variables_old/normalization_advisor/generate_report.py
src/biogeme/latent_variables_old/normalization_advisor/report.py
src/biogeme/likelihood/__init__.py
src/biogeme/likelihood/bootstrap.py
src/biogeme/likelihood/linear_regression.py
src/biogeme/likelihood/model_estimation.py
src/biogeme/likelihood/negative_likelihood.py
src/biogeme/mdcev/__init__.py
src/biogeme/mdcev/database_utils.py
src/biogeme/mdcev/gamma_profile.py
src/biogeme/mdcev/generalized.py
src/biogeme/mdcev/mdcev.py
src/biogeme/mdcev/non_monotonic.py
src/biogeme/mdcev/translated.py
src/biogeme/model_elements/__init__.py
src/biogeme/model_elements/audit.py
src/biogeme/model_elements/database_adapter.py
src/biogeme/model_elements/model_elements.py
src/biogeme/models/__init__.py
src/biogeme/models/boxcox.py
src/biogeme/models/cnl.py
src/biogeme/models/logit.py
src/biogeme/models/mev.py
src/biogeme/models/nested.py
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src/biogeme/models/piecewise.py
src/biogeme/profiling/__init__.py
src/biogeme/profiling/benchmark.py
src/biogeme/profiling/environment.py
src/biogeme/profiling/jax_profile.py
src/biogeme/profiling/timing.py
src/biogeme/results_processing/__init__.py
src/biogeme/results_processing/compilation.py
src/biogeme/results_processing/estimation_results.py
src/biogeme/results_processing/f12_output.py
src/biogeme/results_processing/html_output.py
src/biogeme/results_processing/latex_output.py
src/biogeme/results_processing/pandas_output.py
src/biogeme/results_processing/pareto.py
src/biogeme/results_processing/raw_estimation_results.py
src/biogeme/results_processing/recycle_pickle.py
src/biogeme/results_processing/variance_covariance.py
src/biogeme/sampling_of_alternatives/__init__.py
src/biogeme/sampling_of_alternatives/choice_set_generation.py
src/biogeme/sampling_of_alternatives/generate_model.py
src/biogeme/sampling_of_alternatives/sampling_context.py
src/biogeme/sampling_of_alternatives/sampling_of_alternatives.py
src/biogeme/segmentation/__init__.py
src/biogeme/segmentation/database.py
src/biogeme/segmentation/one_segmentation.py
src/biogeme/segmentation/segmentation.py
src/biogeme/segmentation/segmentation_context.py
src/biogeme/segmentation/segmented_beta.py
src/biogeme/tools/__init__.py
src/biogeme/tools/checks.py
src/biogeme/tools/database.py
src/biogeme/tools/derivatives.py
src/biogeme/tools/ellipse.py
src/biogeme/tools/files.py
src/biogeme/tools/formatting.py
src/biogeme/tools/jax_multicore.py
src/biogeme/tools/likelihood_ratio.py
src/biogeme/tools/pandas_to_latex.py
src/biogeme/tools/primes.py
src/biogeme/tools/pymc_utils.py
src/biogeme/tools/serialize_numpy.py
src/biogeme/tools/simulate.py
src/biogeme/tools/time.py
src/biogeme/tools/timeit_context_manager.py
src/biogeme/tools/timeit_decorator.py
src/biogeme/tools/unique_ids.py
src/biogeme/tools/yaml.py
src/biogeme/validation/__init__.py
src/biogeme/validation/cross_validation.py
src/biogeme/validation/prepare_validation.py
src/biogeme/validation/split_databases.py
tests/_test_all_examples.py
tests/simple_test.py
tests/assisted/test_assisted.py
tests/bayesian/test_bayesian_elem.py
tests/bayesian/test_bayesian_results.py
tests/bayesian/test_bayesian_summary.py
tests/bayesian/test_boxcox_bayesian.py
tests/bayesian/test_cross_nested_logit_bayesian.py
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tests/catalog/test_catalog.py
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tests/catalog/test_central_controller.py
tests/catalog/test_extract_multiple_expression.py
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