.gitignore
CHANGELOG.md
CODE_OF_CONDUCT.md
LICENSE
MANIFEST.in
README.md
pyproject.toml
.github/workflows/pypi_release.yaml
.github/workflows/tests.yaml
docs/.gitignore
docs/CNAME
docs/README.md
docs/_quarto.yml
docs/_variables.yml
docs/conduct.md
docs/index.md
docs/overview.md
docs/preview
docs/publish
docs/quarto_utils.py
docs/render
docs/requirements.txt
docs/tutorials.md
docs/whats-new.md
docs/assets/favicon.ico
docs/assets/starsim-logo-dark.png
docs/assets/starsim-logo.png
docs/assets/styles-dark.scss
docs/assets/styles-light.scss
docs/assets/styles.css
docs/tutorials/nigeria_cancer_cases.csv
docs/tutorials/nigeria_cancer_types.csv
docs/tutorials/south_africa_age_pyramid.csv
docs/tutorials/tut_analyzers.qmd
docs/tutorials/tut_calibration.qmd
docs/tutorials/tut_interventions.qmd
docs/tutorials/tut_intro.qmd
docs/tutorials/tut_people.qmd
docs/tutorials/tut_plotting.qmd
docs/tutorials/tut_running.qmd
examples/t05_screen_algorithms.py
hpvsim/__init__.py
hpvsim/analysis.py
hpvsim/base.py
hpvsim/calibration.py
hpvsim/defaults.py
hpvsim/hiv.py
hpvsim/immunity.py
hpvsim/interventions.py
hpvsim/misc.py
hpvsim/parameters.py
hpvsim/people.py
hpvsim/plotting.py
hpvsim/population.py
hpvsim/run.py
hpvsim/settings.py
hpvsim/sim.py
hpvsim/utils.py
hpvsim/version.py
hpvsim.egg-info/PKG-INFO
hpvsim.egg-info/SOURCES.txt
hpvsim.egg-info/dependency_links.txt
hpvsim.egg-info/entry_points.txt
hpvsim.egg-info/requires.txt
hpvsim.egg-info/top_level.txt
hpvsim/data/__init__.py
hpvsim/data/downloaders.py
hpvsim/data/loaders.py
hpvsim/data/products_dx.csv
hpvsim/data/products_tx.csv
hpvsim/data/products_txvx.csv
hpvsim/data/products_vx.csv
hpvsim/data/test_downloaders.py
hpvsim/data/test_loaders.py
hpvsim/regression/pars_v0.2.6.json
hpvsim/regression/pars_v0.2.9.json
hpvsim/regression/pars_v0.3.0.json
hpvsim/regression/pars_v0.3.1.json
tests/.coveragerc
tests/README.md
tests/baseline.json
tests/benchmark.json
tests/benchmark_profile.py
tests/check_coverage
tests/generate_v2_baselines.py
tests/hpvsim_v1.2.2.yml
tests/pytest.ini
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tests/run_tests
tests/simple.py
tests/test_analysis.py
tests/test_baselines.py
tests/test_calibration.py
tests/test_data.py
tests/test_event_schedule.py
tests/test_immunity.py
tests/test_interventions.py
tests/test_misc.py
tests/test_parameters.py
tests/test_people.py
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tests/test_sim.py
tests/test_utils.py
tests/test_v2_regression.py
tests/update_baseline
tests/devtests/check_hiv_data.py
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tests/devtests/multiscale_concept2.py
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tests/devtests/mysql_hpvsim_test.py
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tests/devtests/plot_nathx.py
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tests/devtests/test_cancer_dysp.py
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tests/devtests/test_multiscale.py
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tests/devtests/test_networks.py
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tests/devtests/test_txvx.py
tests/devtests/tut_parameter_exploration.ipynb
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tests/test_data/india_cancer_deaths.csv
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tests/test_data/kenya_cancer_incidence.csv
tests/test_data/kenya_cancer_mortality.csv
tests/test_data/kenya_data.csv
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tests/test_data/south_africa_age_pyramid.csv
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tests/test_data/south_africa_art_coverage_by_age_males.csv
tests/test_data/south_africa_cancer_data_2020.csv
tests/test_data/south_africa_cancer_data_hiv_2020.csv
tests/test_data/south_africa_cancer_incidence_by_age_no_hiv.csv
tests/test_data/south_africa_cancer_incidence_by_age_with_hiv.csv
tests/test_data/south_africa_female_hiv_mortality.csv
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